Analysis of interatomic Contacts of Structural Units in PDB entry:
6KL9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KL9 entry

There are 4 chains in PDB entry 6KL9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 1227
B
 HIS 116LEU 232
C
 HIS 116LEU 232
G
 A 1 C 25
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 6KL9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 7Right-handed 310
Helix 2
AA2
A
26 35Right-handed alpha
Helix 3
AA3
A
40 46Right-handed alpha
Helix 4
AA4
A
46 66Right-handed alpha
Helix 5
AA5
A
67 69Right-handed 310
Helix 6
AA6
A
73 80Right-handed alpha
Helix 7
AA7
A
91 112Right-handed alpha
Helix 8
AA8
A
120 125Right-handed 310
Helix 9
AA9
A
126 132Right-handed alpha
Helix 10
AB1
A
134 143Right-handed alpha
Helix 11
AB2
A
151 159Right-handed alpha
Helix 12
AB3
A
171 176Right-handed alpha
Helix 13
AB4
A
178 194Right-handed alpha
Helix 14
AB5
A
204 211Right-handed alpha
Helix 15
AB6
A
216 221Right-handed 310
Helix 16
AB7
A
222 229Right-handed 310
Helix 17
AB8
A
230 242Right-handed alpha
Helix 18
AB9
A
254 263Right-handed alpha
Helix 19
AC1
A
297 309Right-handed alpha
Helix 20
AC2
A
312 325Right-handed alpha
Helix 21
AC3
A
342 350Right-handed alpha
Helix 22
AC4
A
357 371Right-handed alpha
Helix 23
AC5
A
378 392Right-handed alpha
Helix 24
AC6
A
397 402Right-handed alpha
Helix 25
AC7
A
409 432Right-handed alpha
Helix 26
AC8
A
449 472Right-handed alpha
Helix 27
AC9
A
483 488Right-handed alpha
Helix 28
AD1
A
493 512Right-handed alpha
Helix 29
AD2
A
563 567Right-handed 310
Helix 30
AD3
A
588 591Right-handed 310
Helix 31
AD4
A
592 598Right-handed alpha
Helix 32
AD5
A
612 619Right-handed alpha
Helix 33
AD6
A
629 642Right-handed alpha
Helix 34
AD7
A
666 676Right-handed alpha
Helix 35
AD8
A
686 697Right-handed alpha
Helix 36
AD9
A
706 710Right-handed 310
Helix 37
AE1
A
718 726Right-handed alpha
Helix 38
AE2
A
752 756Right-handed 310
Helix 39
AE3
A
786 790Right-handed 310
Helix 40
AE4
A
811 822Right-handed alpha
Helix 41
AE5
A
872 885Right-handed alpha
Helix 42
AE6
A
890 919Right-handed alpha
Helix 43
AE7
A
939 954Right-handed alpha
Helix 44
AE8
A
1021 1031Right-handed alpha
Helix 45
AE9
A
1091 1100Right-handed alpha
Helix 46
AF1
A
1101 1104Right-handed 310
Helix 47
AF2
A
1111 1116Right-handed alpha
Helix 48
AF3
A
1120 1135Right-handed alpha
Helix 49
AF4
A
1163 1167Right-handed 310
Helix 50
AF5
A
1178 1199Right-handed alpha
Helix 51
AF6
A
1205 1209Right-handed 310
Helix 52
AF7
A
1214 1225Right-handed alpha
Helix 53
AF8
B
118 149Right-handed alpha
Helix 54
AF9
B
228 232Right-handed 310
Helix 55
AG1
C
118 150Right-handed alpha
Helix 56
AG2
C
166 170Right-handed 310
Helix 57
AG3
C
200 204Right-handed 310
Helix 58
AG4
C
228 232Right-handed 310
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There are 15 sheets in PDB entry 6KL9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
520 522first strand
Strand 2
A
743 747anti-parallel
Strand 3
A
793 802anti-parallel
Strand 4
A
13 23anti-parallel
Strand 5
A
699 705anti-parallel
Strand 6
A
552 558anti-parallel
Strand 7
A
544 549anti-parallel
Strand 8
A
579 581anti-parallel
Strand 9
A
682 683anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
520 522first strand
Strand 2
A
743 747anti-parallel
Strand 3
A
793 802anti-parallel
Strand 4
A
736 738anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 244first strand
Strand 2
A
252 253anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 338first strand
Strand 2
A
395 396anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
758 759first strand
Strand 2
A
783 784anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
765 766first strand
Strand 2
A
776 777anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
850 855first strand
Strand 2
A
839 844anti-parallel
Strand 3
A
828 833anti-parallel
Strand 4
A
921 922parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
858 863first strand
Strand 2
A
866 871anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1033 1037first strand
Strand 2
A
1042 1048anti-parallel
Strand 3
A
1062 1065anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1070 1073first strand
Strand 2
A
1087 1090anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1138 1140first strand
Strand 2
A
1148 1150anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
180 181first strand
Strand 2
B
157 161anti-parallel
Strand 3
B
209 212anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
183 187first strand
Strand 2
B
194 197anti-parallel
Strand 3
B
206 207anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
158 161first strand
Strand 2
C
209 212anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
183 187first strand
Strand 2
C
194 197anti-parallel
Strand 3
C
206 207anti-parallel
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