Analysis of interatomic Contacts of Structural Units in PDB entry:
6KLC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KLC entry

There is 1 chain in PDB entry 6KLC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 1821
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 6KLC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 16Right-handed alpha
Helix 2
AA2
A
20 31Right-handed alpha
Helix 3
AA3
A
34 59Right-handed alpha
Helix 4
AA4
A
68 76Right-handed alpha
Helix 5
AA5
A
108 133Right-handed alpha
Helix 6
AA6
A
153 168Right-handed alpha
Helix 7
AA7
A
170 177Right-handed alpha
Helix 8
AA8
A
179 190Right-handed alpha
Helix 9
AA9
A
213 222Right-handed alpha
Helix 10
AB1
A
232 249Right-handed alpha
Helix 11
AB2
A
254 258Right-handed 310
Helix 12
AB3
A
262 273Right-handed alpha
Helix 13
AB4
A
283 292Right-handed alpha
Helix 14
AB5
A
295 301Right-handed alpha
Helix 15
AB6
A
321 336Right-handed alpha
Helix 16
AB7
A
344 359Right-handed alpha
Helix 17
AB8
A
394 409Right-handed alpha
Helix 18
AB9
A
410 411Right-handed 310
Helix 19
AC1
A
415 415Right-handed 310
Helix 20
AC2
A
416 436Right-handed alpha
Helix 21
AC3
A
447 452Right-handed alpha
Helix 22
AC4
A
460 468Right-handed alpha
Helix 23
AC5
A
493 510Right-handed alpha
Helix 24
AC6
A
578 586Right-handed 310
Helix 25
AC7
A
590 602Right-handed alpha
Helix 26
AC8
A
612 630Right-handed alpha
Helix 27
AC9
A
632 651Right-handed alpha
Helix 28
AD1
A
658 662Right-handed 310
Helix 29
AD2
A
669 686Right-handed alpha
Helix 30
AD3
A
694 709Right-handed alpha
Helix 31
AD4
A
717 737Right-handed alpha
Helix 32
AD5
A
748 762Right-handed alpha
Helix 33
AD6
A
782 795Right-handed alpha
Helix 34
AD7
A
846 862Right-handed alpha
Helix 35
AD8
A
870 886Right-handed alpha
Helix 36
AD9
A
901 907Right-handed alpha
Helix 37
AE1
A
912 929Right-handed alpha
Helix 38
AE2
A
1093 1098Right-handed alpha
Helix 39
AE3
A
1139 1159Right-handed alpha
Helix 40
AE4
A
1167 1184Right-handed alpha
Helix 41
AE5
A
1201 1211Right-handed alpha
Helix 42
AE6
A
1225 1238Right-handed alpha
Helix 43
AE7
A
1244 1261Right-handed alpha
Helix 44
AE8
A
1270 1282Right-handed alpha
Helix 45
AE9
A
1299 1323Right-handed alpha
Helix 46
AF1
A
1340 1350Right-handed alpha
Helix 47
AF2
A
1350 1368Right-handed alpha
Helix 48
AF3
A
1398 1408Right-handed alpha
Helix 49
AF4
A
1414 1432Right-handed alpha
Helix 50
AF5
A
1435 1452Right-handed alpha
Helix 51
AF6
A
1475 1488Right-handed alpha
Helix 52
AF7
A
1490 1506Right-handed alpha
Helix 53
AF8
A
1511 1518Right-handed alpha
Helix 54
AF9
A
1525 1533Right-handed alpha
Helix 55
AG1
A
1580 1590Right-handed alpha
Helix 56
AG2
A
1614 1626Right-handed alpha
Helix 57
AG3
A
1640 1649Right-handed alpha
Helix 58
AG4
A
1686 1701Right-handed alpha
Helix 59
AG5
A
1703 1707Right-handed 310
Helix 60
AG6
A
1742 1752Right-handed alpha
Helix 61
AG7
A
1781 1788Right-handed alpha
Helix 62
AG8
A
1797 1802Right-handed alpha
Helix 63
AG9
A
1813 1820Right-handed alpha
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There are 8 sheets in PDB entry 6KLC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 62first strand
Strand 2
A
90 94anti-parallel
Strand 3
A
97 105anti-parallel
Strand 4
A
136 144parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
537 542first strand
Strand 2
A
547 552anti-parallel
Strand 3
A
560 565anti-parallel
Strand 4
A
573 577anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1121 1126first strand
Strand 2
A
1133 1138anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1326 1330first strand
Strand 2
A
1334 1339anti-parallel
Strand 3
A
1188 1192anti-parallel
Strand 4
A
1378 1379anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1241 1242first strand
Strand 2
A
1287 1288anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1382 1385first strand
Strand 2
A
1388 1391anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1548 1550first strand
Strand 2
A
1683 1685anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1631 1632first strand
Strand 2
A
1638 1639anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il