Analysis of interatomic Contacts of Structural Units in PDB entry:
6KLD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KLD entry

There is 1 chain in PDB entry 6KLD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2GLN 1815
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 6KLD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 12Right-handed alpha
Helix 2
AA2
A
19 31Right-handed alpha
Helix 3
AA3
A
34 57Right-handed alpha
Helix 4
AA4
A
68 76Right-handed alpha
Helix 5
AA5
A
108 133Right-handed alpha
Helix 6
AA6
A
155 171Right-handed alpha
Helix 7
AA7
A
182 190Right-handed alpha
Helix 8
AA8
A
214 223Right-handed alpha
Helix 9
AA9
A
231 250Right-handed alpha
Helix 10
AB1
A
262 274Right-handed alpha
Helix 11
AB2
A
284 289Right-handed alpha
Helix 12
AB3
A
289 303Right-handed alpha
Helix 13
AB4
A
322 340Right-handed alpha
Helix 14
AB5
A
346 366Right-handed alpha
Helix 15
AB6
A
389 391Right-handed 310
Helix 16
AB7
A
396 405Right-handed alpha
Helix 17
AB8
A
412 421Right-handed alpha
Helix 18
AB9
A
440 451Right-handed alpha
Helix 19
AC1
A
474 478Right-handed 310
Helix 20
AC2
A
481 501Right-handed alpha
Helix 21
AC3
A
574 578Right-handed 310
Helix 22
AC4
A
579 583Right-handed 310
Helix 23
AC5
A
586 598Right-handed alpha
Helix 24
AC6
A
605 623Right-handed alpha
Helix 25
AC7
A
625 644Right-handed alpha
Helix 26
AC8
A
651 655Right-handed 310
Helix 27
AC9
A
662 679Right-handed alpha
Helix 28
AD1
A
689 701Right-handed alpha
Helix 29
AD2
A
702 705Right-handed 310
Helix 30
AD3
A
712 732Right-handed alpha
Helix 31
AD4
A
745 760Right-handed alpha
Helix 32
AD5
A
776 789Right-handed alpha
Helix 33
AD6
A
833 852Right-handed alpha
Helix 34
AD7
A
864 874Right-handed alpha
Helix 35
AD8
A
887 895Right-handed alpha
Helix 36
AD9
A
898 921Right-handed alpha
Helix 37
AE1
A
961 967Right-handed alpha
Helix 38
AE2
A
971 975Right-handed 310
Helix 39
AE3
A
981 989Right-handed alpha
Helix 40
AE4
A
1009 1021Right-handed alpha
Helix 41
AE5
A
1024 1035Right-handed alpha
Helix 42
AE6
A
1135 1156Right-handed alpha
Helix 43
AE7
A
1163 1181Right-handed alpha
Helix 44
AE8
A
1197 1208Right-handed alpha
Helix 45
AE9
A
1221 1233Right-handed alpha
Helix 46
AF1
A
1239 1249Right-handed alpha
Helix 47
AF2
A
1264 1273Right-handed alpha
Helix 48
AF3
A
1295 1319Right-handed alpha
Helix 49
AF4
A
1351 1365Right-handed alpha
Helix 50
AF5
A
1395 1405Right-handed alpha
Helix 51
AF6
A
1411 1429Right-handed alpha
Helix 52
AF7
A
1435 1450Right-handed alpha
Helix 53
AF8
A
1472 1485Right-handed alpha
Helix 54
AF9
A
1488 1507Right-handed alpha
Helix 55
AG1
A
1513 1520Right-handed alpha
Helix 56
AG2
A
1523 1535Right-handed alpha
Helix 57
AG3
A
1537 1545Right-handed alpha
Helix 58
AG4
A
1579 1590Right-handed alpha
Helix 59
AG5
A
1614 1625Right-handed alpha
Helix 60
AG6
A
1639 1645Right-handed alpha
Helix 61
AG7
A
1664 1669Right-handed 310
Helix 62
AG8
A
1678 1694Right-handed alpha
Helix 63
AG9
A
1695 1699Right-handed 310
Helix 64
AH1
A
1735 1744Right-handed alpha
Helix 65
AH2
A
1744 1750Right-handed alpha
Helix 66
AH3
A
1758 1764Right-handed alpha
Helix 67
AH4
A
1777 1783Right-handed alpha
Helix 68
AH5
A
1787 1793Right-handed alpha
Helix 69
AH6
A
1805 1809Right-handed alpha
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There are 10 sheets in PDB entry 6KLD. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 94first strand
Strand 2
A
97 105anti-parallel
Strand 3
A
136 144parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 260first strand
Strand 2
A
646 648anti-parallel
Strand 3
A
1374 1376anti-parallel
Strand 4
A
1183 1188anti-parallel
Strand 5
A
1330 1336anti-parallel
Strand 6
A
1321 1326anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 387first strand
Strand 2
A
393 395anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
529 534first strand
Strand 2
A
540 545anti-parallel
Strand 3
A
553 560anti-parallel
Strand 4
A
565 573anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1116 1117first strand
Strand 2
A
1235 1237parallel
Strand 3
A
1283 1284anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1119 1122first strand
Strand 2
A
1129 1132anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1379 1380first strand
Strand 2
A
1387 1388anti-parallel
Strand 3
A
1391 1392anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1548 1549first strand
Strand 2
A
1676 1677anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1630 1631first strand
Strand 2
A
1637 1638anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1716 1719first strand
Strand 2
A
1801 1804anti-parallel
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