Analysis of interatomic Contacts of Structural Units in PDB entry:
6KLI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KLI entry

There is 1 chain in PDB entry 6KLI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4CYS 550
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6KLI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
68 72Right-handed 310
Helix 2
AA2
A
109 113Right-handed 310
Helix 3
AA3
A
148 160Right-handed alpha
Helix 4
AA4
A
182 186Right-handed 310
Helix 5
AA5
A
293 298Right-handed 310
Helix 6
AA6
A
311 320Right-handed alpha
Helix 7
AA7
A
361 365Right-handed 310
Helix 8
AA8
A
382 390Right-handed alpha
Helix 9
AA9
A
415 420Right-handed 310
Helix 10
AB1
A
474 479Right-handed 310
Helix 11
AB2
A
516 523Right-handed alpha
Helix 12
AB3
A
535 539Right-handed 310
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There are 7 sheets in PDB entry 6KLI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 27first strand
Strand 2
A
5 17anti-parallel
Strand 3
A
43 50parallel
Strand 4
A
87 93anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 39first strand
Strand 2
A
115 121parallel
Strand 3
A
99 105anti-parallel
Strand 4
A
58 61anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 171first strand
Strand 2
A
135 144anti-parallel
Strand 3
A
196 203parallel
Strand 4
A
244 250anti-parallel
Strand 5
A
219 224anti-parallel
Strand 6
A
227 234anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 191first strand
Strand 2
A
283 289parallel
Strand 3
A
262 270anti-parallel
Strand 4
A
209 214anti-parallel
Strand 5
A
237 239anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 371first strand
Strand 2
A
340 351anti-parallel
Strand 3
A
434 442parallel
Strand 4
A
496 504anti-parallel
Strand 5
A
460 467anti-parallel
Strand 6
A
486 487anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
374 376first strand
Strand 2
A
422 424parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
427 430first strand
Strand 2
A
525 530parallel
Strand 3
A
508 514anti-parallel
Strand 4
A
452 455anti-parallel
Strand 5
A
489 491anti-parallel
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