Analysis of interatomic Contacts of Structural Units in PDB entry:
6KQI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KQI entry

There is 1 chain in PDB entry 6KQI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 101PRO 413
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6KQI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
104 109Right-handed 310
Helix 2
AA2
A
112 127Right-handed alpha
Helix 3
AA3
A
127 144Right-handed alpha
Helix 4
AA4
A
144 149Right-handed alpha
Helix 5
AA5
A
154 163Right-handed alpha
Helix 6
AA6
A
164 179Right-handed alpha
Helix 7
AA7
A
185 220Right-handed alpha
Helix 8
AA8
A
223 228Right-handed alpha
Helix 9
AA9
A
229 249Right-handed alpha
Helix 10
AB1
A
272 300Right-handed alpha
Helix 11
AB2
A
1008 1012Right-handed 310
Helix 12
AB3
A
1015 1028Right-handed alpha
Helix 13
AB4
A
1047 1059Right-handed alpha
Helix 14
AB5
A
1060 1065Right-handed 310
Helix 15
AB6
A
1076 1090Right-handed alpha
Helix 16
AB7
A
1103 1112Right-handed alpha
Helix 17
AB8
A
1125 1134Right-handed alpha
Helix 18
AB9
A
1143 1148Right-handed 310
Helix 19
AC1
A
1162 1175Right-handed alpha
Helix 20
AC2
A
1177 333Right-handed alpha
Helix 21
AC3
A
333 369Right-handed alpha
Helix 22
AC4
A
372 383Right-handed alpha
Helix 23
AC5
A
384 401Right-handed alpha
Helix 24
AC6
A
401 412Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6KQI.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1093 1096first strand
Strand 2
A
1067 1072parallel
Strand 3
A
1033 1038parallel
Strand 4
A
1114 1117parallel
Strand 5
A
1137 1141parallel
Strand 6
A
1156 1158parallel
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