Analysis of interatomic Contacts of Structural Units in PDB entry:
6KR5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KR5 entry

There are 2 chains in PDB entry 6KR5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3HIS 337
B
 ASN 3HIS 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 6KR5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 21Right-handed 310
Helix 2
AA2
A
50 52Right-handed 310
Helix 3
AA3
A
57 72Right-handed alpha
Helix 4
AA4
A
87 101Right-handed alpha
Helix 5
AA5
A
113 123Right-handed alpha
Helix 6
AA6
A
131 133Right-handed 310
Helix 7
AA7
A
134 150Right-handed alpha
Helix 8
AA8
A
162 168Right-handed alpha
Helix 9
AA9
A
168 180Right-handed alpha
Helix 10
AB1
A
194 206Right-handed alpha
Helix 11
AB2
A
220 226Right-handed 310
Helix 12
AB3
A
247 251Right-handed 310
Helix 13
AB4
A
258 274Right-handed alpha
Helix 14
AB5
A
278 294Right-handed alpha
Helix 15
AB6
A
295 298Right-handed 310
Helix 16
AB7
A
309 314Right-handed 310
Helix 17
AB8
A
326 336Right-handed alpha
Helix 18
AB9
B
16 21Right-handed 310
Helix 19
AC1
B
50 52Right-handed 310
Helix 20
AC2
B
57 72Right-handed alpha
Helix 21
AC3
B
87 101Right-handed alpha
Helix 22
AC4
B
113 123Right-handed alpha
Helix 23
AC5
B
131 133Right-handed 310
Helix 24
AC6
B
134 150Right-handed alpha
Helix 25
AC7
B
162 168Right-handed alpha
Helix 26
AC8
B
168 180Right-handed alpha
Helix 27
AC9
B
194 208Right-handed alpha
Helix 28
AD1
B
220 222Right-handed 310
Helix 29
AD2
B
247 251Right-handed 310
Helix 30
AD3
B
258 274Right-handed alpha
Helix 31
AD4
B
278 293Right-handed alpha
Helix 32
AD5
B
294 298Right-handed 310
Helix 33
AD6
B
309 314Right-handed 310
Helix 34
AD7
B
326 336Right-handed alpha
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There are 4 sheets in PDB entry 6KR5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 14first strand
Strand 2
B
26 28parallel
Strand 3
B
43 48anti-parallel
Strand 4
B
301 306parallel
Strand 5
B
186 190parallel
Strand 6
B
212 218parallel
Strand 7
B
253 257parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 257first strand
Strand 2
A
212 218parallel
Strand 3
A
184 190parallel
Strand 4
A
301 306parallel
Strand 5
A
43 48parallel
Strand 6
A
26 28anti-parallel
Strand 7
B
13 14parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 130first strand
Strand 2
A
104 109parallel
Strand 3
A
80 84parallel
Strand 4
A
154 156parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 130first strand
Strand 2
B
104 109parallel
Strand 3
B
80 84parallel
Strand 4
B
154 156parallel
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