Analysis of interatomic Contacts of Structural Units in PDB entry:
6KR6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KR6 entry

There are 2 chains in PDB entry 6KR6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 93LEU 843
B
 U 1 N 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6KR6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
127 137Right-handed alpha
Helix 2
AA2
A
190 206Right-handed alpha
Helix 3
AA3
A
207 209Right-handed 310
Helix 4
AA4
A
220 223Right-handed 310
Helix 5
AA5
A
263 272Right-handed alpha
Helix 6
AA6
A
281 287Right-handed alpha
Helix 7
AA7
A
324 332Right-handed alpha
Helix 8
AA8
A
364 366Right-handed 310
Helix 9
AA9
A
381 392Right-handed alpha
Helix 10
AB1
A
394 412Right-handed alpha
Helix 11
AB2
A
412 422Right-handed alpha
Helix 12
AB3
A
486 505Right-handed alpha
Helix 13
AB4
A
520 533Right-handed alpha
Helix 14
AB5
A
547 560Right-handed alpha
Helix 15
AB6
A
571 575Right-handed alpha
Helix 16
AB7
A
578 594Right-handed alpha
Helix 17
AB8
A
657 674Right-handed alpha
Helix 18
AB9
A
691 714Right-handed alpha
Helix 19
AC1
A
786 798Right-handed alpha
Helix 20
AC2
A
811 827Right-handed alpha
Helix 21
AC3
A
833 837Right-handed 310
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There are 9 sheets in PDB entry 6KR6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
641 647first strand
Strand 2
A
625 632anti-parallel
Strand 3
A
608 617anti-parallel
Strand 4
A
679 685parallel
Strand 5
A
720 728parallel
Strand 6
A
774 781anti-parallel
Strand 7
A
758 762anti-parallel
Strand 8
A
745 747anti-parallel
Strand 9
A
432 438anti-parallel
Strand 10
A
94 101anti-parallel
Strand 11
A
734 735anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 213first strand
Strand 2
A
216 218anti-parallel
Strand 3
A
231 243anti-parallel
Strand 4
A
224 226anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 213first strand
Strand 2
A
216 218anti-parallel
Strand 3
A
231 243anti-parallel
Strand 4
A
248 260anti-parallel
Strand 5
A
103 107anti-parallel
Strand 6
A
425 426anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
152 155anti-parallel
Strand 3
A
115 121anti-parallel
Strand 4
A
175 185anti-parallel
Strand 5
A
163 168anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 301first strand
Strand 2
A
290 293anti-parallel
Strand 3
A
368 369anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 306first strand
Strand 2
A
343 345anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 316first strand
Strand 2
A
321 323anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
449 451first strand
Strand 2
A
442 444anti-parallel
Strand 3
A
600 601anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 516first strand
Strand 2
A
479 483parallel
Strand 3
A
539 543parallel
Strand 4
A
566 570parallel
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