Analysis of interatomic Contacts of Structural Units in PDB entry:
6KR7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KR7 entry

There is 1 chain in PDB entry 6KR7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 7PHE 1061
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 6KR7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 28Right-handed alpha
Helix 2
AA2
A
33 38Right-handed alpha
Helix 3
AA3
A
60 78Right-handed alpha
Helix 4
AA4
A
95 110Right-handed alpha
Helix 5
AA5
A
157 165Right-handed alpha
Helix 6
AA6
A
167 175Right-handed 310
Helix 7
AA7
A
176 196Right-handed alpha
Helix 8
AA8
A
200 204Right-handed 310
Helix 9
AA9
A
211 228Right-handed alpha
Helix 10
AB1
A
249 253Right-handed 310
Helix 11
AB2
A
276 283Right-handed 310
Helix 12
AB3
A
295 302Right-handed 310
Helix 13
AB4
A
327 337Right-handed alpha
Helix 14
AB5
A
355 358Right-handed 310
Helix 15
AB6
A
396 409Right-handed alpha
Helix 16
AB7
A
409 415Right-handed alpha
Helix 17
AB8
A
419 423Right-handed 310
Helix 18
AB9
A
440 449Right-handed alpha
Helix 19
AC1
A
456 467Right-handed alpha
Helix 20
AC2
A
486 489Right-handed 310
Helix 21
AC3
A
490 501Right-handed alpha
Helix 22
AC4
A
536 550Right-handed alpha
Helix 23
AC5
A
554 568Right-handed alpha
Helix 24
AC6
A
600 611Right-handed alpha
Helix 25
AC7
A
626 630Right-handed 310
Helix 26
AC8
A
631 640Right-handed alpha
Helix 27
AC9
A
651 666Right-handed alpha
Helix 28
AD1
A
676 678Right-handed 310
Helix 29
AD2
A
680 693Right-handed alpha
Helix 30
AD3
A
696 700Right-handed 310
Helix 31
AD4
A
726 735Right-handed alpha
Helix 32
AD5
A
736 747Right-handed alpha
Helix 33
AD6
A
756 780Right-handed alpha
Helix 34
AD7
A
781 784Right-handed 310
Helix 35
AD8
A
791 814Right-handed alpha
Helix 36
AD9
A
816 825Right-handed alpha
Helix 37
AE1
A
825 839Right-handed alpha
Helix 38
AE2
A
844 860Right-handed alpha
Helix 39
AE3
A
863 874Right-handed alpha
Helix 40
AE4
A
879 883Right-handed 310
Helix 41
AE5
A
892 913Right-handed alpha
Helix 42
AE6
A
945 962Right-handed alpha
Helix 43
AE7
A
968 977Right-handed alpha
Helix 44
AE8
A
979 984Right-handed 310
Helix 45
AE9
A
985 1003Right-handed alpha
Helix 46
AF1
A
1004 1009Right-handed 310
Helix 47
AF2
A
1015 1022Right-handed alpha
Helix 48
AF3
A
1023 1031Right-handed alpha
Helix 49
AF4
A
1045 1052Right-handed alpha
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There are 8 sheets in PDB entry 6KR7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 85first strand
Strand 2
A
45 49parallel
Strand 3
A
670 674parallel
Strand 4
A
703 707parallel
Strand 5
A
551 552parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 247first strand
Strand 2
A
231 241anti-parallel
Strand 3
A
523 532anti-parallel
Strand 4
A
571 572anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 353first strand
Strand 2
A
312 317anti-parallel
Strand 3
A
323 326anti-parallel
Strand 4
A
287 293parallel
Strand 5
A
261 271anti-parallel
Strand 6
A
361 363anti-parallel
Strand 7
A
372 376anti-parallel
Strand 8
A
304 307parallel
Strand 9
A
388 390anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 353first strand
Strand 2
A
312 317anti-parallel
Strand 3
A
323 326anti-parallel
Strand 4
A
287 293parallel
Strand 5
A
261 271anti-parallel
Strand 6
A
504 510anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
432 433first strand
Strand 2
A
476 477anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
574 575first strand
Strand 2
A
590 591anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
715 716first strand
Strand 2
A
710 712anti-parallel
Strand 3
A
753 755parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1035 1039first strand
Strand 2
A
935 939parallel
Strand 3
A
1058 1060anti-parallel
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