Analysis of interatomic Contacts of Structural Units in PDB entry:
6KU0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KU0 entry

There are 4 chains in PDB entry 6KU0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 1471VAL 1853
B
 GLN 800THR 822
C
 PHE 1471VAL 1853
D
 GLN 800THR 822
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 6KU0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1478 1480Right-handed 310
Helix 2
AA2
A
1481 1490Right-handed alpha
Helix 3
AA3
A
1497 1503Right-handed alpha
Helix 4
AA4
A
1505 1521Right-handed alpha
Helix 5
AA5
A
1523 1546Right-handed alpha
Helix 6
AA6
A
1548 1569Right-handed alpha
Helix 7
AA7
A
1572 1576Right-handed 310
Helix 8
AA8
A
1580 1586Right-handed alpha
Helix 9
AA9
A
1593 1628Right-handed alpha
Helix 10
AB1
A
1658 1676Right-handed alpha
Helix 11
AB2
A
1679 1705Right-handed alpha
Helix 12
AB3
A
1710 1731Right-handed alpha
Helix 13
AB4
A
1733 1737Right-handed 310
Helix 14
AB5
A
1738 1741Right-handed 310
Helix 15
AB6
A
1742 1752Right-handed alpha
Helix 16
AB7
A
1758 1769Right-handed alpha
Helix 17
AB8
A
1773 1784Right-handed alpha
Helix 18
AB9
A
1795 1806Right-handed alpha
Helix 19
AC1
A
1835 1839Right-handed 310
Helix 20
AC2
A
1842 1846Right-handed 310
Helix 21
AC3
B
809 818Right-handed alpha
Helix 22
AC4
C
1478 1480Right-handed 310
Helix 23
AC5
C
1481 1490Right-handed alpha
Helix 24
AC6
C
1494 1502Right-handed alpha
Helix 25
AC7
C
1505 1521Right-handed alpha
Helix 26
AC8
C
1523 1546Right-handed alpha
Helix 27
AC9
C
1548 1569Right-handed alpha
Helix 28
AD1
C
1572 1576Right-handed 310
Helix 29
AD2
C
1580 1586Right-handed alpha
Helix 30
AD3
C
1593 1628Right-handed alpha
Helix 31
AD4
C
1658 1676Right-handed alpha
Helix 32
AD5
C
1679 1705Right-handed alpha
Helix 33
AD6
C
1710 1731Right-handed alpha
Helix 34
AD7
C
1733 1737Right-handed 310
Helix 35
AD8
C
1738 1741Right-handed 310
Helix 36
AD9
C
1742 1754Right-handed alpha
Helix 37
AE1
C
1758 1769Right-handed alpha
Helix 38
AE2
C
1773 1784Right-handed alpha
Helix 39
AE3
C
1795 1806Right-handed alpha
Helix 40
AE4
C
1835 1839Right-handed 310
Helix 41
AE5
C
1842 1846Right-handed 310
Helix 42
AE6
D
809 818Right-handed alpha
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There are 4 sheets in PDB entry 6KU0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1475 1476first strand
Strand 2
A
1851 1852anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1591 1592first strand
Strand 2
B
804 805parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1475 1476first strand
Strand 2
C
1851 1852anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1591 1592first strand
Strand 2
D
804 805parallel
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