Analysis of interatomic Contacts of Structural Units in PDB entry:
6KUV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KUV entry

There are 5 chains in PDB entry 6KUV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 4GLU 710
B
 MET 1SER 752
C
 SER 2ALA 254
R
 U 1 C 10
V
 A 1 A 13
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 6KUV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 11Right-handed alpha
Helix 2
AA2
A
15 29Right-handed alpha
Helix 3
AA3
A
32 49Right-handed alpha
Helix 4
AA4
A
72 84Right-handed alpha
Helix 5
AA5
A
114 125Right-handed alpha
Helix 6
AA6
A
150 170Right-handed alpha
Helix 7
AA7
A
191 198Right-handed alpha
Helix 8
AA8
A
207 217Right-handed alpha
Helix 9
AA9
A
223 234Right-handed alpha
Helix 10
AB1
A
283 295Right-handed alpha
Helix 11
AB2
A
296 300Right-handed 310
Helix 12
AB3
A
312 328Right-handed alpha
Helix 13
AB4
A
336 343Right-handed alpha
Helix 14
AB5
A
381 390Right-handed alpha
Helix 15
AB6
A
416 432Right-handed alpha
Helix 16
AB7
A
434 457Right-handed alpha
Helix 17
AB8
A
556 564Right-handed alpha
Helix 18
AB9
A
565 568Right-handed 310
Helix 19
AC1
A
569 589Right-handed alpha
Helix 20
AC2
A
622 637Right-handed alpha
Helix 21
AC3
A
639 661Right-handed alpha
Helix 22
AC4
A
670 678Right-handed alpha
Helix 23
AC5
A
684 703Right-handed alpha
Helix 24
AC6
B
6 12Right-handed 310
Helix 25
AC7
B
18 22Right-handed 310
Helix 26
AC8
B
35 49Right-handed alpha
Helix 27
AC9
B
86 99Right-handed alpha
Helix 28
AD1
B
104 118Right-handed alpha
Helix 29
AD2
B
121 127Right-handed 310
Helix 30
AD3
B
141 157Right-handed alpha
Helix 31
AD4
B
164 177Right-handed alpha
Helix 32
AD5
B
216 224Right-handed alpha
Helix 33
AD6
B
250 268Right-handed alpha
Helix 34
AD7
B
281 292Right-handed alpha
Helix 35
AD8
B
316 328Right-handed alpha
Helix 36
AD9
B
333 339Right-handed alpha
Helix 37
AE1
B
341 347Right-handed alpha
Helix 38
AE2
B
378 382Right-handed 310
Helix 39
AE3
B
383 392Right-handed alpha
Helix 40
AE4
B
393 397Right-handed 310
Helix 41
AE5
B
416 426Right-handed alpha
Helix 42
AE6
B
456 475Right-handed alpha
Helix 43
AE7
B
510 514Right-handed 310
Helix 44
AE8
B
523 537Right-handed alpha
Helix 45
AE9
B
541 561Right-handed alpha
Helix 46
AF1
B
573 580Right-handed alpha
Helix 47
AF2
B
586 590Right-handed 310
Helix 48
AF3
B
591 595Right-handed 310
Helix 49
AF4
B
601 605Right-handed 310
Helix 50
AF5
B
608 614Right-handed alpha
Helix 51
AF6
B
618 626Right-handed alpha
Helix 52
AF7
B
668 672Right-handed 310
Helix 53
AF8
B
675 696Right-handed alpha
Helix 54
AF9
B
710 728Right-handed alpha
Helix 55
AG1
B
732 752Right-handed alpha
Helix 56
AG2
C
3 15Right-handed alpha
Helix 57
AG3
C
29 31Right-handed 310
Helix 58
AG4
C
32 37Right-handed alpha
Helix 59
AG5
C
46 56Right-handed alpha
Helix 60
AG6
C
65 72Right-handed alpha
Helix 61
AG7
C
98 108Right-handed alpha
Helix 62
AG8
C
114 122Right-handed alpha
Helix 63
AG9
C
122 134Right-handed alpha
Helix 64
AH1
C
164 172Right-handed alpha
Helix 65
AH2
C
175 179Right-handed 310
Helix 66
AH3
C
186 198Right-handed alpha
Helix 67
AH4
C
206 215Right-handed alpha
Helix 68
AH5
C
232 237Right-handed 310
Helix 69
AH6
C
238 243Right-handed alpha
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There are 14 sheets in PDB entry 6KUV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 64first strand
Strand 2
A
95 97anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 109first strand
Strand 2
A
130 134parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 276first strand
Strand 2
A
475 478anti-parallel
Strand 3
A
469 472anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
350 352first strand
Strand 2
B
366 370parallel
Strand 3
B
357 360anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
463 466first strand
Strand 2
A
482 485anti-parallel
Strand 3
A
498 506anti-parallel
Strand 4
A
543 555anti-parallel
Strand 5
A
524 527anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
601 604first strand
Strand 2
A
616 619anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
666 667first strand
Strand 2
B
484 486anti-parallel
Strand 3
B
300 305anti-parallel
Strand 4
B
448 454anti-parallel
Strand 5
B
438 443anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 56first strand
Strand 2
B
65 66anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 133first strand
Strand 2
B
138 140anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 185first strand
Strand 2
B
210 214anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
242 245first strand
Strand 2
B
225 230anti-parallel
Strand 3
B
349 352parallel
Strand 4
B
401 404anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
492 493first strand
Strand 2
B
496 497anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
61 64first strand
Strand 2
C
94 97anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
149 153first strand
Strand 2
C
222 226anti-parallel
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