Analysis of interatomic Contacts of Structural Units in PDB entry:
6KUW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KUW entry

There are 2 chains in PDB entry 6KUW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 41ARG 454
B
 PRO 41PHE 453
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 6KUW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 79Right-handed alpha
Helix 2
AA2
A
80 83Right-handed 310
Helix 3
AA3
A
84 86Right-handed 310
Helix 4
AA4
A
87 104Right-handed alpha
Helix 5
AA5
A
104 115Right-handed alpha
Helix 6
AA6
A
119 155Right-handed alpha
Helix 7
AA7
A
155 161Right-handed alpha
Helix 8
AA8
A
164 184Right-handed alpha
Helix 9
AA9
A
207 219Right-handed alpha
Helix 10
AB1
A
219 240Right-handed alpha
Helix 11
AB2
A
1015 1028Right-handed alpha
Helix 12
AB3
A
1047 1060Right-handed alpha
Helix 13
AB4
A
1061 1065Right-handed 310
Helix 14
AB5
A
1076 1090Right-handed alpha
Helix 15
AB6
A
1101 1110Right-handed alpha
Helix 16
AB7
A
1125 1135Right-handed alpha
Helix 17
AB8
A
1144 1150Right-handed alpha
Helix 18
AB9
A
1162 1178Right-handed alpha
Helix 19
AC1
A
1181 409Right-handed alpha
Helix 20
AC2
A
410 413Right-handed 310
Helix 21
AC3
A
415 429Right-handed alpha
Helix 22
AC4
A
432 441Right-handed alpha
Helix 23
AC5
A
441 453Right-handed alpha
Helix 24
AC6
B
47 77Right-handed alpha
Helix 25
AC7
B
84 86Right-handed 310
Helix 26
AC8
B
87 104Right-handed alpha
Helix 27
AC9
B
104 115Right-handed alpha
Helix 28
AD1
B
119 155Right-handed alpha
Helix 29
AD2
B
157 162Right-handed alpha
Helix 30
AD3
B
164 184Right-handed alpha
Helix 31
AD4
B
207 219Right-handed alpha
Helix 32
AD5
B
219 238Right-handed alpha
Helix 33
AD6
B
1008 1012Right-handed 310
Helix 34
AD7
B
1015 1027Right-handed alpha
Helix 35
AD8
B
1047 1059Right-handed alpha
Helix 36
AD9
B
1076 1090Right-handed alpha
Helix 37
AE1
B
1101 1110Right-handed alpha
Helix 38
AE2
B
1125 1134Right-handed alpha
Helix 39
AE3
B
1145 1150Right-handed alpha
Helix 40
AE4
B
1162 1178Right-handed alpha
Helix 41
AE5
B
1181 409Right-handed alpha
Helix 42
AE6
B
410 412Right-handed 310
Helix 43
AE7
B
415 441Right-handed alpha
Helix 44
AE8
B
441 453Right-handed alpha
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There are 2 sheets in PDB entry 6KUW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1093 1096first strand
Strand 2
A
1067 1072parallel
Strand 3
A
1033 1037parallel
Strand 4
A
1114 1117parallel
Strand 5
A
1137 1141parallel
Strand 6
A
1156 1158parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1093 1096first strand
Strand 2
B
1068 1072parallel
Strand 3
B
1034 1037parallel
Strand 4
B
1114 1117parallel
Strand 5
B
1137 1141parallel
Strand 6
B
1156 1158parallel
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