Analysis of interatomic Contacts of Structural Units in PDB entry:
6KWA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KWA entry

There are 3 chains in PDB entry 6KWA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 8LEU 274
B
 MET 8ARG 273
C
 MET 8PHE 266
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6KWA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 33Right-handed alpha
Helix 2
AA2
A
44 59Right-handed alpha
Helix 3
AA3
A
62 67Right-handed alpha
Helix 4
AA4
A
98 109Right-handed alpha
Helix 5
AA5
A
112 141Right-handed alpha
Helix 6
AA6
A
219 226Right-handed alpha
Helix 7
AA7
A
263 267Right-handed 310
Helix 8
AA8
B
18 33Right-handed alpha
Helix 9
AA9
B
44 59Right-handed alpha
Helix 10
AB1
B
62 67Right-handed alpha
Helix 11
AB2
B
98 110Right-handed alpha
Helix 12
AB3
B
112 140Right-handed alpha
Helix 13
AB4
B
164 168Right-handed 310
Helix 14
AB5
B
219 226Right-handed alpha
Helix 15
AB6
B
263 267Right-handed 310
Helix 16
AB7
C
18 30Right-handed alpha
Helix 17
AB8
C
44 60Right-handed alpha
Helix 18
AB9
C
62 67Right-handed alpha
Helix 19
AC1
C
98 109Right-handed alpha
Helix 20
AC2
C
112 141Right-handed alpha
Helix 21
AC3
C
219 226Right-handed alpha
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There are 6 sheets in PDB entry 6KWA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 13first strand
Strand 2
A
35 39parallel
Strand 3
A
214 218anti-parallel
Strand 4
A
182 186anti-parallel
Strand 5
A
244 252anti-parallel
Strand 6
A
154 162anti-parallel
Strand 7
A
88 94anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 176first strand
Strand 2
A
235 238anti-parallel
Strand 3
A
194 197anti-parallel
Strand 4
A
204 207anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 13first strand
Strand 2
B
35 39parallel
Strand 3
B
214 218anti-parallel
Strand 4
B
182 186anti-parallel
Strand 5
B
244 252anti-parallel
Strand 6
B
154 162anti-parallel
Strand 7
B
88 94anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 176first strand
Strand 2
B
235 238anti-parallel
Strand 3
B
194 197anti-parallel
Strand 4
B
204 206anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 13first strand
Strand 2
C
36 39parallel
Strand 3
C
214 218anti-parallel
Strand 4
C
182 187anti-parallel
Strand 5
C
244 252anti-parallel
Strand 6
C
154 162anti-parallel
Strand 7
C
88 94anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
195 196first strand
Strand 2
C
235 236anti-parallel
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