Analysis of interatomic Contacts of Structural Units in PDB entry:
6KWU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KWU entry

There is 1 chain in PDB entry 6KWU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
O
 MET 26LYS 270
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 6KWU. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
O
261 269Right-handed alpha
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There are 3 sheets in PDB entry 6KWU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
29 34first strand
Strand 2
O
38 43anti-parallel
Strand 3
O
52 58anti-parallel
Strand 4
O
61 67anti-parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
74 79first strand
Strand 2
O
85 90anti-parallel
Strand 3
O
96 102anti-parallel
Strand 4
O
109 116anti-parallel
Strand 5
O
119 126anti-parallel
Strand 6
O
129 135anti-parallel
Strand 7
O
141 147anti-parallel
Strand 8
O
153 159anti-parallel
Strand 9
O
162 168anti-parallel
Strand 10
O
172 179anti-parallel
Strand 11
O
182 189anti-parallel
Strand 12
O
194 200anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
209 214first strand
Strand 2
O
219 224anti-parallel
Strand 3
O
227 234anti-parallel
Strand 4
O
240 244anti-parallel
Strand 5
O
257 258anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il