Analysis of interatomic Contacts of Structural Units in PDB entry:
6KXE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KXE entry

There are 2 chains in PDB entry 6KXE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 7TYR 407
B
 GLY 18GLY 375
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 6KXE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 35Right-handed alpha
Helix 2
AA2
A
62 66Right-handed 310
Helix 3
AA3
A
71 75Right-handed 310
Helix 4
AA4
A
76 93Right-handed alpha
Helix 5
AA5
A
96 102Right-handed alpha
Helix 6
AA6
A
115 130Right-handed alpha
Helix 7
AA7
A
131 135Right-handed 310
Helix 8
AA8
A
136 141Right-handed alpha
Helix 9
AA9
A
142 143Right-handed 310
Helix 10
AB1
A
144 145Right-handed 310
Helix 11
AB2
A
146 157Right-handed alpha
Helix 12
AB3
A
168 170Right-handed 310
Helix 13
AB4
A
171 186Right-handed alpha
Helix 14
AB5
A
201 211Right-handed alpha
Helix 15
AB6
A
243 249Right-handed alpha
Helix 16
AB7
A
273 289Right-handed alpha
Helix 17
AB8
A
291 295Right-handed 310
Helix 18
AB9
A
305 321Right-handed alpha
Helix 19
AC1
A
330 335Right-handed alpha
Helix 20
AC2
A
337 339Right-handed 310
Helix 21
AC3
A
340 356Right-handed alpha
Helix 22
AC4
B
34 45Right-handed alpha
Helix 23
AC5
B
53 57Right-handed 310
Helix 24
AC6
B
71 77Right-handed alpha
Helix 25
AC7
B
85 100Right-handed alpha
Helix 26
AC8
B
124 138Right-handed alpha
Helix 27
AC9
B
145 147Right-handed 310
Helix 28
AD1
B
148 153Right-handed alpha
Helix 29
AD2
B
155 166Right-handed alpha
Helix 30
AD3
B
176 178Right-handed 310
Helix 31
AD4
B
179 194Right-handed alpha
Helix 32
AD5
B
209 220Right-handed alpha
Helix 33
AD6
B
242 244Right-handed 310
Helix 34
AD7
B
264 281Right-handed alpha
Helix 35
AD8
B
283 285Right-handed 310
Helix 36
AD9
B
297 311Right-handed alpha
Helix 37
AE1
B
312 317Right-handed alpha
Helix 38
AE2
B
322 326Right-handed 310
Helix 39
AE3
B
328 330Right-handed 310
Helix 40
AE4
B
331 347Right-handed alpha
Helix 41
AE5
B
348 351Right-handed 310
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There are 7 sheets in PDB entry 6KXE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
10 19anti-parallel
Strand 3
A
234 242anti-parallel
Strand 4
A
191 198anti-parallel
Strand 5
A
105 110parallel
Strand 6
A
161 166parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
10 19anti-parallel
Strand 3
A
255 264anti-parallel
Strand 4
A
398 405anti-parallel
Strand 5
A
387 394anti-parallel
Strand 6
A
297 299parallel
Strand 7
A
326 328parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 41first strand
Strand 2
A
54 55anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 358first strand
Strand 2
A
381 382anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 33first strand
Strand 2
B
20 29anti-parallel
Strand 3
B
232 240anti-parallel
Strand 4
B
199 206anti-parallel
Strand 5
B
114 119parallel
Strand 6
B
171 174parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 33first strand
Strand 2
B
20 29anti-parallel
Strand 3
B
250 259anti-parallel
Strand 4
B
365 373anti-parallel
Strand 5
B
354 360anti-parallel
Strand 6
B
287 291parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 51first strand
Strand 2
B
63 64anti-parallel
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