Analysis of interatomic Contacts of Structural Units in PDB entry:
6KYH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KYH entry

There are 8 chains in PDB entry 6KYH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PHE 7ARG 355
B
PHE 7ARG 355
C
PHE 7ARG 355
D
PHE 7ARG 355
F
MET 1LYS 167
G
MET 1HIS 166
H
MET 1HIS 166
E
MET 1HIS 166
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are100 helices in PDB entry 6KYH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
16 18Right-handed 310
Helix 2
AA2
A
31 43Right-handed alpha
Helix 3
AA3
A
73 77Right-handed 310
Helix 4
AA4
A
103 111Right-handed alpha
Helix 5
AA5
A
112 126Right-handed alpha
Helix 6
AA6
A
127 137Right-handed alpha
Helix 7
AA7
A
151 157Right-handed alpha
Helix 8
AA8
A
162 172Right-handed alpha
Helix 9
AA9
A
185 193Right-handed alpha
Helix 10
AB1
A
195 205Right-handed alpha
Helix 11
AB2
A
218 227Right-handed alpha
Helix 12
AB3
A
230 239Right-handed alpha
Helix 13
AB4
A
252 261Right-handed alpha
Helix 14
AB5
A
262 272Right-handed alpha
Helix 15
AB6
A
285 294Right-handed alpha
Helix 16
AB7
A
295 305Right-handed alpha
Helix 17
AB8
A
318 327Right-handed alpha
Helix 18
AB9
A
328 338Right-handed alpha
Helix 19
AC1
A
339 343Right-handed 310
Helix 20
AC2
B
16 18Right-handed 310
Helix 21
AC3
B
31 43Right-handed alpha
Helix 22
AC4
B
73 77Right-handed 310
Helix 23
AC5
B
103 111Right-handed alpha
Helix 24
AC6
B
112 125Right-handed alpha
Helix 25
AC7
B
127 137Right-handed alpha
Helix 26
AC8
B
151 158Right-handed alpha
Helix 27
AC9
B
162 172Right-handed alpha
Helix 28
AD1
B
185 193Right-handed alpha
Helix 29
AD2
B
195 205Right-handed alpha
Helix 30
AD3
B
218 227Right-handed alpha
Helix 31
AD4
B
230 239Right-handed alpha
Helix 32
AD5
B
252 261Right-handed alpha
Helix 33
AD6
B
262 272Right-handed alpha
Helix 34
AD7
B
285 294Right-handed alpha
Helix 35
AD8
B
295 305Right-handed alpha
Helix 36
AD9
B
318 327Right-handed alpha
Helix 37
AE1
B
328 338Right-handed alpha
Helix 38
AE2
B
339 343Right-handed 310
Helix 39
AE3
C
31 44Right-handed alpha
Helix 40
AE4
C
49 51Right-handed 310
Helix 41
AE5
C
73 77Right-handed 310
Helix 42
AE6
C
104 111Right-handed alpha
Helix 43
AE7
C
112 125Right-handed alpha
Helix 44
AE8
C
127 137Right-handed alpha
Helix 45
AE9
C
151 159Right-handed alpha
Helix 46
AF1
C
162 172Right-handed alpha
Helix 47
AF2
C
185 193Right-handed alpha
Helix 48
AF3
C
195 205Right-handed alpha
Helix 49
AF4
C
218 227Right-handed alpha
Helix 50
AF5
C
230 239Right-handed alpha
Helix 51
AF6
C
252 261Right-handed alpha
Helix 52
AF7
C
262 272Right-handed alpha
Helix 53
AF8
C
285 294Right-handed alpha
Helix 54
AF9
C
295 305Right-handed alpha
Helix 55
AG1
C
318 327Right-handed alpha
Helix 56
AG2
C
328 338Right-handed alpha
Helix 57
AG3
C
339 343Right-handed 310
Helix 58
AG4
D
31 44Right-handed alpha
Helix 59
AG5
D
49 51Right-handed 310
Helix 60
AG6
D
73 77Right-handed 310
Helix 61
AG7
D
103 111Right-handed alpha
Helix 62
AG8
D
112 125Right-handed alpha
Helix 63
AG9
D
127 137Right-handed alpha
Helix 64
AH1
D
151 159Right-handed alpha
Helix 65
AH2
D
162 172Right-handed alpha
Helix 66
AH3
D
185 193Right-handed alpha
Helix 67
AH4
D
195 205Right-handed alpha
Helix 68
AH5
D
218 227Right-handed alpha
Helix 69
AH6
D
230 239Right-handed alpha
Helix 70
AH7
D
252 261Right-handed alpha
Helix 71
AH8
D
262 272Right-handed alpha
Helix 72
AH9
D
285 294Right-handed alpha
Helix 73
AI1
D
295 305Right-handed alpha
Helix 74
AI2
D
318 327Right-handed alpha
Helix 75
AI3
D
328 338Right-handed alpha
Helix 76
AI4
D
339 343Right-handed 310
Helix 77
AI5
F
15 26Right-handed alpha
Helix 78
AI6
F
61 66Right-handed 310
Helix 79
AI7
F
67 75Right-handed alpha
Helix 80
AI8
F
86 105Right-handed alpha
Helix 81
AI9
F
126 138Right-handed alpha
Helix 82
AJ1
F
151 167Right-handed alpha
Helix 83
AJ2
G
15 26Right-handed alpha
Helix 84
AJ3
G
61 66Right-handed 310
Helix 85
AJ4
G
67 75Right-handed alpha
Helix 86
AJ5
G
86 105Right-handed alpha
Helix 87
AJ6
G
126 138Right-handed alpha
Helix 88
AJ7
G
151 166Right-handed alpha
Helix 89
AJ8
H
15 26Right-handed alpha
Helix 90
AJ9
H
62 66Right-handed 310
Helix 91
AK1
H
67 75Right-handed alpha
Helix 92
AK2
H
86 105Right-handed alpha
Helix 93
AK3
H
126 138Right-handed alpha
Helix 94
AK4
H
151 166Right-handed alpha
Helix 95
AK5
E
15 26Right-handed alpha
Helix 96
AK6
E
61 66Right-handed 310
Helix 97
AK7
E
67 75Right-handed alpha
Helix 98
AK8
E
86 105Right-handed alpha
Helix 99
AK9
E
126 138Right-handed alpha
Helix 100
AL1
E
151 166Right-handed alpha
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There are 4 sheets in PDB entry 6KYH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
66 67first strand
Strand 2
A
54 57anti-parallel
Strand 3
A
87 91anti-parallel
Strand 4
A
9 15parallel
Strand 5
A
20 26anti-parallel
Strand 6
E
37 46anti-parallel
Strand 7
E
49 58anti-parallel
Strand 8
E
3 10parallel
Strand 9
E
77 83parallel
Strand 10
E
111 116parallel
Strand 11
E
141 143parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
66 67first strand
Strand 2
B
54 57anti-parallel
Strand 3
B
87 91anti-parallel
Strand 4
B
9 15parallel
Strand 5
B
20 26anti-parallel
Strand 6
F
37 46anti-parallel
Strand 7
F
49 58anti-parallel
Strand 8
F
2 10parallel
Strand 9
F
77 83parallel
Strand 10
F
111 116parallel
Strand 11
F
141 143parallel
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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
66 67first strand
Strand 2
C
53 57anti-parallel
Strand 3
C
87 92anti-parallel
Strand 4
C
9 15parallel
Strand 5
C
20 26anti-parallel
Strand 6
G
37 46anti-parallel
Strand 7
G
49 58anti-parallel
Strand 8
G
2 10parallel
Strand 9
G
77 83parallel
Strand 10
G
111 116parallel
Strand 11
G
141 143parallel
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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
66 67first strand
Strand 2
D
53 57anti-parallel
Strand 3
D
87 92anti-parallel
Strand 4
D
9 15parallel
Strand 5
D
20 26anti-parallel
Strand 6
H
37 46anti-parallel
Strand 7
H
49 58anti-parallel
Strand 8
H
2 10parallel
Strand 9
H
77 83parallel
Strand 10
H
111 116parallel
Strand 11
H
141 143parallel
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