Analysis of interatomic Contacts of Structural Units in PDB entry:
6KZ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KZ9 entry

There is 1 chain in PDB entry 6KZ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2THR 810
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6KZ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
114 116Right-handed 310
Helix 2
AA2
A
152 154Right-handed 310
Helix 3
AA3
A
210 222Right-handed alpha
Helix 4
AA4
A
253 264Right-handed alpha
Helix 5
AA5
A
275 278Right-handed 310
Helix 6
AA6
A
279 286Right-handed alpha
Helix 7
AA7
A
291 300Right-handed alpha
Helix 8
AA8
A
395 399Right-handed 310
Helix 9
AA9
A
414 432Right-handed alpha
Helix 10
AB1
A
439 444Right-handed 310
Helix 11
AB2
A
481 488Right-handed alpha
Helix 12
AB3
A
501 513Right-handed alpha
Helix 13
AB4
A
527 531Right-handed 310
Helix 14
AB5
A
537 541Right-handed 310
Helix 15
AB6
A
546 562Right-handed alpha
Helix 16
AB7
A
581 609Right-handed alpha
Helix 17
AB8
A
614 617Right-handed 310
Helix 18
AB9
A
645 654Right-handed alpha
Helix 19
AC1
A
680 685Right-handed alpha
Helix 20
AC2
A
710 725Right-handed alpha
Helix 21
AC3
A
728 733Right-handed 310
Helix 22
AC4
A
736 756Right-handed alpha
Helix 23
AC5
A
805 810Right-handed alpha
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There are 6 sheets in PDB entry 6KZ9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 88first strand
Strand 2
A
4 17anti-parallel
Strand 3
A
141 150anti-parallel
Strand 4
A
122 127anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
50 56anti-parallel
Strand 3
A
90 97anti-parallel
Strand 4
A
104 112anti-parallel
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There are 15 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 309first strand
Strand 2
A
267 273parallel
Strand 3
A
225 230parallel
Strand 4
A
335 341anti-parallel
Strand 5
A
351 358anti-parallel
Strand 6
A
408 413anti-parallel
Strand 7
A
177 186anti-parallel
Strand 8
A
462 471anti-parallel
Strand 9
A
691 697anti-parallel
Strand 10
A
671 675anti-parallel
Strand 11
A
663 667anti-parallel
Strand 12
A
516 521anti-parallel
Strand 13
A
566 570parallel
Strand 14
A
619 627parallel
Strand 15
A
655 657anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
491 492first strand
Strand 2
A
497 500anti-parallel
Strand 3
A
462 471anti-parallel
Strand 4
A
691 697anti-parallel
Strand 5
A
671 675anti-parallel
Strand 6
A
663 667anti-parallel
Strand 7
A
516 521anti-parallel
Strand 8
A
566 570parallel
Strand 9
A
619 627parallel
Strand 10
A
767 769anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
405 406first strand
Strand 2
A
659 660parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
772 774first strand
Strand 2
A
780 782anti-parallel
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