Analysis of interatomic Contacts of Structural Units in PDB entry:
6KZP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KZP entry

There is 1 chain in PDB entry 6KZP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 80LYS 1836
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 6KZP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
80 100Right-handed alpha
Helix 2
AA2
A
111 136Right-handed alpha
Helix 3
AA3
A
151 172Right-handed alpha
Helix 4
AA4
A
179 188Right-handed 310
Helix 5
AA5
A
189 194Right-handed alpha
Helix 6
AA6
A
194 208Right-handed alpha
Helix 7
AA7
A
211 234Right-handed alpha
Helix 8
AA8
A
281 285Right-handed 310
Helix 9
AA9
A
315 320Right-handed 310
Helix 10
AB1
A
329 334Right-handed alpha
Helix 11
AB2
A
339 352Right-handed alpha
Helix 12
AB3
A
355 367Right-handed alpha
Helix 13
AB4
A
368 370Right-handed 310
Helix 14
AB5
A
371 382Right-handed alpha
Helix 15
AB6
A
386 405Right-handed alpha
Helix 16
AB7
A
743 761Right-handed alpha
Helix 17
AB8
A
769 796Right-handed alpha
Helix 18
AB9
A
798 803Right-handed alpha
Helix 19
AC1
A
805 823Right-handed alpha
Helix 20
AC2
A
832 836Right-handed alpha
Helix 21
AC3
A
837 845Right-handed 310
Helix 22
AC4
A
849 865Right-handed alpha
Helix 23
AC5
A
865 887Right-handed alpha
Helix 24
AC6
A
909 921Right-handed alpha
Helix 25
AC7
A
924 936Right-handed alpha
Helix 26
AC8
A
937 939Right-handed 310
Helix 27
AC9
A
940 953Right-handed alpha
Helix 28
AD1
A
954 968Right-handed alpha
Helix 29
AD2
A
1243 1252Right-handed alpha
Helix 30
AD3
A
1252 1272Right-handed alpha
Helix 31
AD4
A
1283 1309Right-handed alpha
Helix 32
AD5
A
1322 1344Right-handed alpha
Helix 33
AD6
A
1350 1362Right-handed alpha
Helix 34
AD7
A
1363 1366Right-handed 310
Helix 35
AD8
A
1367 1372Right-handed alpha
Helix 36
AD9
A
1372 1386Right-handed alpha
Helix 37
AE1
A
1389 1412Right-handed alpha
Helix 38
AE2
A
1428 1436Right-handed alpha
Helix 39
AE3
A
1448 1461Right-handed alpha
Helix 40
AE4
A
1464 1475Right-handed alpha
Helix 41
AE5
A
1487 1489Right-handed 310
Helix 42
AE6
A
1490 1518Right-handed alpha
Helix 43
AE7
A
1590 1607Right-handed alpha
Helix 44
AE8
A
1613 1643Right-handed alpha
Helix 45
AE9
A
1645 1650Right-handed alpha
Helix 46
AF1
A
1651 1668Right-handed alpha
Helix 47
AF2
A
1669 1676Right-handed alpha
Helix 48
AF3
A
1681 1692Right-handed alpha
Helix 49
AF4
A
1693 1700Right-handed 310
Helix 50
AF5
A
1703 1716Right-handed alpha
Helix 51
AF6
A
1716 1743Right-handed alpha
Helix 52
AF7
A
1764 1777Right-handed alpha
Helix 53
AF8
A
1780 1789Right-handed alpha
Helix 54
AF9
A
1800 1832Right-handed alpha
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There are 2 sheets in PDB entry 6KZP. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 242first strand
Strand 2
A
322 325anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1416 1419first strand
Strand 2
A
1438 1441anti-parallel
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