Analysis of interatomic Contacts of Structural Units in PDB entry:
6KZT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KZT entry

There is 1 chain in PDB entry 6KZT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 10TRP 405
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6KZT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 35Right-handed alpha
Helix 2
AA2
A
54 64Right-handed alpha
Helix 3
AA3
A
69 73Right-handed 310
Helix 4
AA4
A
90 94Right-handed 310
Helix 5
AA5
A
99 108Right-handed alpha
Helix 6
AA6
A
111 137Right-handed alpha
Helix 7
AA7
A
142 146Right-handed alpha
Helix 8
AA8
A
148 160Right-handed alpha
Helix 9
AA9
A
165 174Right-handed alpha
Helix 10
AB1
A
175 178Right-handed 310
Helix 11
AB2
A
184 204Right-handed alpha
Helix 12
AB3
A
212 220Right-handed alpha
Helix 13
AB4
A
228 243Right-handed alpha
Helix 14
AB5
A
245 260Right-handed alpha
Helix 15
AB6
A
261 271Right-handed alpha
Helix 16
AB7
A
274 286Right-handed alpha
Helix 17
AB8
A
318 324Right-handed alpha
Helix 18
AB9
A
349 353Right-handed 310
Helix 19
AC1
A
356 375Right-handed alpha
Helix 20
AC2
A
383 387Right-handed 310
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There are 2 sheets in PDB entry 6KZT. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 14first strand
Strand 2
A
37 42parallel
Strand 3
A
49 52anti-parallel
Strand 4
A
314 317parallel
Strand 5
A
296 298anti-parallel
Strand 6
A
67 68anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 141first strand
Strand 2
A
402 404anti-parallel
Strand 3
A
379 380anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il