Analysis of interatomic Contacts of Structural Units in PDB entry:
6L0V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L0V entry

There are 8 chains in PDB entry 6L0V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 1006VAL 1066
B
 GLY 272ILE 287
C
 GLU 1006VAL 1066
D
 GLY 272ILE 287
E
 GLU 1006MET 1065
F
 GLY 272ILE 287
G
 GLU 1006MET 1065
H
 GLY 272ILE 287
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6L0V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1042 1061Right-handed alpha
Helix 2
AA2
C
1042 1061Right-handed alpha
Helix 3
AA3
E
1042 1061Right-handed alpha
Helix 4
AA4
G
1025 1027Right-handed 310
Helix 5
AA5
G
1042 1061Right-handed alpha
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There are 4 sheets in PDB entry 6L0V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1007 1012first strand
Strand 2
A
1017 1023anti-parallel
Strand 3
A
1030 1037anti-parallel
Strand 4
B
282 286anti-parallel
Strand 5
B
274 276anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1007 1012first strand
Strand 2
C
1017 1023anti-parallel
Strand 3
C
1030 1037anti-parallel
Strand 4
D
282 286anti-parallel
Strand 5
D
274 276anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1009 1012first strand
Strand 2
E
1017 1023anti-parallel
Strand 3
E
1029 1037anti-parallel
Strand 4
F
282 286anti-parallel
Strand 5
F
274 276anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
1008 1012first strand
Strand 2
G
1017 1023anti-parallel
Strand 3
G
1029 1037anti-parallel
Strand 4
H
282 286anti-parallel
Strand 5
H
274 276anti-parallel
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