Analysis of interatomic Contacts of Structural Units in PDB entry:
6L1H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L1H entry

There are 2 chains in PDB entry 6L1H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 5LEU 321
B
 PRO 5LEU 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6L1H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 29Right-handed alpha
Helix 2
AA2
A
39 50Right-handed alpha
Helix 3
AA3
A
53 55Right-handed 310
Helix 4
AA4
A
66 79Right-handed alpha
Helix 5
AA5
A
109 116Right-handed alpha
Helix 6
AA6
A
116 133Right-handed alpha
Helix 7
AA7
A
168 173Right-handed alpha
Helix 8
AA8
A
188 216Right-handed alpha
Helix 9
AA9
A
230 234Right-handed 310
Helix 10
AB1
A
237 251Right-handed alpha
Helix 11
AB2
A
257 271Right-handed alpha
Helix 12
AB3
A
272 275Right-handed 310
Helix 13
AB4
A
299 303Right-handed 310
Helix 14
AB5
A
304 320Right-handed alpha
Helix 15
AB6
B
16 29Right-handed alpha
Helix 16
AB7
B
39 50Right-handed alpha
Helix 17
AB8
B
53 55Right-handed 310
Helix 18
AB9
B
66 79Right-handed alpha
Helix 19
AC1
B
109 116Right-handed alpha
Helix 20
AC2
B
116 133Right-handed alpha
Helix 21
AC3
B
168 173Right-handed alpha
Helix 22
AC4
B
188 216Right-handed alpha
Helix 23
AC5
B
230 234Right-handed 310
Helix 24
AC6
B
237 251Right-handed alpha
Helix 25
AC7
B
257 271Right-handed alpha
Helix 26
AC8
B
272 275Right-handed 310
Helix 27
AC9
B
299 304Right-handed alpha
Helix 28
AD1
B
304 320Right-handed alpha
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There are 2 sheets in PDB entry 6L1H. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 61first strand
Strand 2
A
32 37parallel
Strand 3
A
8 12parallel
Strand 4
A
84 89parallel
Strand 5
A
139 143parallel
Strand 6
A
218 223parallel
Strand 7
A
279 282parallel
Strand 8
A
294 297anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 61first strand
Strand 2
B
32 37parallel
Strand 3
B
8 12parallel
Strand 4
B
84 89parallel
Strand 5
B
139 143parallel
Strand 6
B
218 223parallel
Strand 7
B
279 282parallel
Strand 8
B
294 295anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il