Analysis of interatomic Contacts of Structural Units in PDB entry:
6L1K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L1K entry

There is 1 chain in PDB entry 6L1K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2LYS 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6L1K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 30Right-handed alpha
Helix 2
AA2
A
44 50Right-handed alpha
Helix 3
AA3
A
51 63Right-handed alpha
Helix 4
AA4
A
78 93Right-handed alpha
Helix 5
AA5
A
102 117Right-handed alpha
Helix 6
AA6
A
122 127Right-handed alpha
Helix 7
AA7
A
148 152Right-handed 310
Helix 8
AA8
A
171 174Right-handed 310
Helix 9
AA9
A
181 188Right-handed 310
Helix 10
AB1
A
189 209Right-handed alpha
Helix 11
AB2
A
215 239Right-handed alpha
Helix 12
AB3
A
242 259Right-handed alpha
Helix 13
AB4
A
260 263Right-handed 310
Helix 14
AB5
A
269 282Right-handed alpha
Helix 15
AB6
A
285 302Right-handed alpha
Helix 16
AB7
A
305 318Right-handed alpha
Helix 17
AB8
A
321 336Right-handed alpha
Helix 18
AB9
A
341 346Right-handed 310
Helix 19
AC1
A
351 361Right-handed alpha
Helix 20
AC2
A
373 385Right-handed alpha
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There are 2 sheets in PDB entry 6L1K. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 14first strand
Strand 2
A
177 180parallel
Strand 3
A
138 142parallel
Strand 4
A
96 101parallel
Strand 5
A
35 41parallel
Strand 6
A
66 73parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 159first strand
Strand 2
A
164 169anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il