Analysis of interatomic Contacts of Structural Units in PDB entry:
6L1L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L1L entry

There are 2 chains in PDB entry 6L1L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 392
B
 MET 1SER 393
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 6L1L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 11Right-handed alpha
Helix 2
AA2
A
47 58Right-handed alpha
Helix 3
AA3
A
59 64Right-handed 310
Helix 4
AA4
A
72 88Right-handed alpha
Helix 5
AA5
A
102 115Right-handed alpha
Helix 6
AA6
A
129 138Right-handed alpha
Helix 7
AA7
A
148 152Right-handed 310
Helix 8
AA8
A
156 160Right-handed 310
Helix 9
AA9
A
185 199Right-handed alpha
Helix 10
AB1
A
220 224Right-handed 310
Helix 11
AB2
A
226 230Right-handed alpha
Helix 12
AB3
A
243 247Right-handed 310
Helix 13
AB4
A
254 269Right-handed alpha
Helix 14
AB5
A
273 286Right-handed alpha
Helix 15
AB6
A
288 314Right-handed alpha
Helix 16
AB7
A
336 348Right-handed alpha
Helix 17
AB8
A
356 363Right-handed 310
Helix 18
AB9
A
373 386Right-handed alpha
Helix 19
AC1
B
5 10Right-handed alpha
Helix 20
AC2
B
14 29Right-handed alpha
Helix 21
AC3
B
47 58Right-handed alpha
Helix 22
AC4
B
59 64Right-handed 310
Helix 23
AC5
B
72 87Right-handed alpha
Helix 24
AC6
B
102 113Right-handed alpha
Helix 25
AC7
B
128 138Right-handed alpha
Helix 26
AC8
B
148 152Right-handed 310
Helix 27
AC9
B
156 160Right-handed 310
Helix 28
AD1
B
161 165Right-handed 310
Helix 29
AD2
B
185 199Right-handed alpha
Helix 30
AD3
B
220 224Right-handed 310
Helix 31
AD4
B
226 230Right-handed alpha
Helix 32
AD5
B
237 241Right-handed alpha
Helix 33
AD6
B
243 247Right-handed 310
Helix 34
AD7
B
254 269Right-handed alpha
Helix 35
AD8
B
273 285Right-handed alpha
Helix 36
AD9
B
288 314Right-handed alpha
Helix 37
AE1
B
336 348Right-handed alpha
Helix 38
AE2
B
356 363Right-handed 310
Helix 39
AE3
B
373 386Right-handed alpha
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There are 6 sheets in PDB entry 6L1L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 36first strand
Strand 2
A
350 351parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 100first strand
Strand 2
A
249 253anti-parallel
Strand 3
A
231 236anti-parallel
Strand 4
A
202 206parallel
Strand 5
A
168 173parallel
Strand 6
A
120 125parallel
Strand 7
A
141 146parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 329first strand
Strand 2
A
365 369anti-parallel
Strand 3
A
353 354anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 36first strand
Strand 2
B
350 351parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 100first strand
Strand 2
B
249 253anti-parallel
Strand 3
B
231 236anti-parallel
Strand 4
B
202 206parallel
Strand 5
B
168 174parallel
Strand 6
B
120 125parallel
Strand 7
B
141 146parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
325 329first strand
Strand 2
B
365 369anti-parallel
Strand 3
B
353 354anti-parallel
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