Analysis of interatomic Contacts of Structural Units in PDB entry:
6L30


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L30 entry

There is 1 chain in PDB entry 6L30 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 140GLU 782
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6L30. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
157 171Right-handed alpha
Helix 2
AA2
A
193 203Right-handed alpha
Helix 3
AA3
A
209 219Right-handed alpha
Helix 4
AA4
A
228 233Right-handed alpha
Helix 5
AA5
A
234 236Right-handed 310
Helix 6
AA6
A
251 265Right-handed alpha
Helix 7
AA7
A
284 287Right-handed 310
Helix 8
AA8
A
303 313Right-handed alpha
Helix 9
AA9
A
317 321Right-handed 310
Helix 10
AB1
A
421 447Right-handed alpha
Helix 11
AB2
A
447 453Right-handed alpha
Helix 12
AB3
A
463 472Right-handed alpha
Helix 13
AB4
A
473 492Right-handed alpha
Helix 14
AB5
A
501 522Right-handed alpha
Helix 15
AB6
A
522 537Right-handed alpha
Helix 16
AB7
A
537 549Right-handed alpha
Helix 17
AB8
A
550 554Right-handed 310
Helix 18
AB9
A
557 581Right-handed alpha
Helix 19
AC1
A
590 604Right-handed alpha
Helix 20
AC2
A
605 607Right-handed 310
Helix 21
AC3
A
610 626Right-handed alpha
Helix 22
AC4
A
632 637Right-handed alpha
Helix 23
AC5
A
748 765Right-handed alpha
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There are 4 sheets in PDB entry 6L30. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 175first strand
Strand 2
A
149 153parallel
Strand 3
A
185 188parallel
Strand 4
A
206 207parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 245first strand
Strand 2
A
268 269parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 248first strand
Strand 2
A
279 282parallel
Strand 3
A
299 302parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
627 628first strand
Strand 2
A
696 703parallel
Strand 3
A
669 675anti-parallel
Strand 4
A
660 666anti-parallel
Strand 5
A
641 650anti-parallel
Strand 6
A
736 742anti-parallel
Strand 7
A
722 727anti-parallel
Strand 8
A
707 713anti-parallel
Strand 9
A
773 776parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il