Analysis of interatomic Contacts of Structural Units in PDB entry:
6L33


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L33 entry

There are 4 chains in PDB entry 6L33 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 96ILE 298
B
 MSE 95ILE 298
C
 ALA 100ILE 298
D
 ALA 100GLY 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 6L33. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
107 114Right-handed alpha
Helix 2
AA2
A
114 126Right-handed alpha
Helix 3
AA3
A
140 147Right-handed alpha
Helix 4
AA4
A
187 194Right-handed alpha
Helix 5
AA5
A
207 215Right-handed alpha
Helix 6
AA6
A
231 237Right-handed alpha
Helix 7
AA7
A
247 256Right-handed alpha
Helix 8
AA8
A
280 283Right-handed 310
Helix 9
AA9
A
284 297Right-handed alpha
Helix 10
AB1
B
109 126Right-handed alpha
Helix 11
AB2
B
140 147Right-handed alpha
Helix 12
AB3
B
187 194Right-handed alpha
Helix 13
AB4
B
207 216Right-handed alpha
Helix 14
AB5
B
231 237Right-handed alpha
Helix 15
AB6
B
247 257Right-handed alpha
Helix 16
AB7
B
280 283Right-handed 310
Helix 17
AB8
B
284 296Right-handed alpha
Helix 18
AB9
C
107 114Right-handed alpha
Helix 19
AC1
C
114 126Right-handed alpha
Helix 20
AC2
C
140 147Right-handed alpha
Helix 21
AC3
C
187 194Right-handed alpha
Helix 22
AC4
C
206 216Right-handed alpha
Helix 23
AC5
C
231 237Right-handed alpha
Helix 24
AC6
C
247 256Right-handed alpha
Helix 25
AC7
C
280 282Right-handed 310
Helix 26
AC8
C
284 298Right-handed alpha
Helix 27
AC9
D
107 126Right-handed alpha
Helix 28
AD1
D
140 148Right-handed alpha
Helix 29
AD2
D
187 194Right-handed alpha
Helix 30
AD3
D
231 237Right-handed alpha
Helix 31
AD4
D
247 255Right-handed alpha
Helix 32
AD5
D
280 282Right-handed 310
Helix 33
AD6
D
284 297Right-handed alpha
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There are 5 sheets in PDB entry 6L33. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 170first strand
Strand 2
A
273 278anti-parallel
Strand 3
A
152 156anti-parallel
Strand 4
A
101 106parallel
Strand 5
A
130 135parallel
Strand 6
B
221 226parallel
Strand 7
B
195 199parallel
Strand 8
B
242 246parallel
Strand 9
B
174 178anti-parallel
Strand 10
B
260 262anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 246first strand
Strand 2
A
174 178anti-parallel
Strand 3
A
260 262anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 199first strand
Strand 2
A
221 226parallel
Strand 3
B
130 135parallel
Strand 4
B
101 106parallel
Strand 5
B
152 156parallel
Strand 6
B
273 278anti-parallel
Strand 7
B
164 170anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
164 172first strand
Strand 2
C
271 278anti-parallel
Strand 3
C
152 155anti-parallel
Strand 4
C
101 106parallel
Strand 5
C
130 135parallel
Strand 6
D
221 225parallel
Strand 7
D
195 198parallel
Strand 8
D
242 246parallel
Strand 9
D
174 178anti-parallel
Strand 10
D
260 262anti-parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
260 262first strand
Strand 2
C
174 178anti-parallel
Strand 3
C
242 246anti-parallel
Strand 4
C
195 199parallel
Strand 5
C
221 226parallel
Strand 6
D
130 135parallel
Strand 7
D
101 106parallel
Strand 8
D
152 155parallel
Strand 9
D
271 278anti-parallel
Strand 10
D
164 172anti-parallel
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