Analysis of interatomic Contacts of Structural Units in PDB entry:
6L3H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L3H entry

There are 2 chains in PDB entry 6L3H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2VAL 746
B
 GLY 2VAL 746
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 6L3H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 25Right-handed alpha
Helix 2
AA2
A
28 33Right-handed alpha
Helix 3
AA3
A
50 63Right-handed alpha
Helix 4
AA4
A
64 69Right-handed 310
Helix 5
AA5
A
82 100Right-handed alpha
Helix 6
AA6
A
112 127Right-handed alpha
Helix 7
AA7
A
142 161Right-handed alpha
Helix 8
AA8
A
182 187Right-handed alpha
Helix 9
AA9
A
188 200Right-handed alpha
Helix 10
AB1
A
218 222Right-handed 310
Helix 11
AB2
A
226 254Right-handed alpha
Helix 12
AB3
A
276 279Right-handed 310
Helix 13
AB4
A
280 288Right-handed alpha
Helix 14
AB5
A
288 302Right-handed alpha
Helix 15
AB6
A
321 326Right-handed alpha
Helix 16
AB7
A
327 359Right-handed alpha
Helix 17
AB8
A
366 394Right-handed alpha
Helix 18
AB9
A
398 400Right-handed 310
Helix 19
AC1
A
401 406Right-handed alpha
Helix 20
AC2
A
416 437Right-handed alpha
Helix 21
AC3
A
438 443Right-handed alpha
Helix 22
AC4
A
449 465Right-handed alpha
Helix 23
AC5
A
466 470Right-handed 310
Helix 24
AC6
A
477 485Right-handed alpha
Helix 25
AC7
A
486 488Right-handed 310
Helix 26
AC8
A
496 512Right-handed alpha
Helix 27
AC9
A
516 534Right-handed alpha
Helix 28
AD1
A
536 543Right-handed 310
Helix 29
AD2
A
551 560Right-handed alpha
Helix 30
AD3
A
564 569Right-handed alpha
Helix 31
AD4
A
570 580Right-handed alpha
Helix 32
AD5
A
581 584Right-handed 310
Helix 33
AD6
A
591 607Right-handed alpha
Helix 34
AD7
A
617 625Right-handed alpha
Helix 35
AD8
A
628 655Right-handed alpha
Helix 36
AD9
A
664 685Right-handed alpha
Helix 37
AE1
A
686 701Right-handed alpha
Helix 38
AE2
A
702 707Right-handed alpha
Helix 39
AE3
A
708 713Right-handed alpha
Helix 40
AE4
A
723 746Right-handed alpha
Helix 41
AE5
B
4 25Right-handed alpha
Helix 42
AE6
B
28 33Right-handed alpha
Helix 43
AE7
B
50 63Right-handed alpha
Helix 44
AE8
B
64 69Right-handed 310
Helix 45
AE9
B
82 100Right-handed alpha
Helix 46
AF1
B
112 127Right-handed alpha
Helix 47
AF2
B
142 161Right-handed alpha
Helix 48
AF3
B
182 187Right-handed alpha
Helix 49
AF4
B
188 200Right-handed alpha
Helix 50
AF5
B
218 222Right-handed 310
Helix 51
AF6
B
226 254Right-handed alpha
Helix 52
AF7
B
276 279Right-handed 310
Helix 53
AF8
B
280 288Right-handed alpha
Helix 54
AF9
B
288 302Right-handed alpha
Helix 55
AG1
B
321 326Right-handed alpha
Helix 56
AG2
B
327 359Right-handed alpha
Helix 57
AG3
B
366 394Right-handed alpha
Helix 58
AG4
B
398 400Right-handed 310
Helix 59
AG5
B
401 406Right-handed alpha
Helix 60
AG6
B
416 437Right-handed alpha
Helix 61
AG7
B
438 443Right-handed alpha
Helix 62
AG8
B
449 465Right-handed alpha
Helix 63
AG9
B
466 470Right-handed 310
Helix 64
AH1
B
477 485Right-handed alpha
Helix 65
AH2
B
486 488Right-handed 310
Helix 66
AH3
B
496 512Right-handed alpha
Helix 67
AH4
B
516 534Right-handed alpha
Helix 68
AH5
B
536 543Right-handed 310
Helix 69
AH6
B
551 560Right-handed alpha
Helix 70
AH7
B
564 569Right-handed alpha
Helix 71
AH8
B
570 580Right-handed alpha
Helix 72
AH9
B
581 584Right-handed 310
Helix 73
AI1
B
591 607Right-handed alpha
Helix 74
AI2
B
617 625Right-handed alpha
Helix 75
AI3
B
628 655Right-handed alpha
Helix 76
AI4
B
664 685Right-handed alpha
Helix 77
AI5
B
686 701Right-handed alpha
Helix 78
AI6
B
702 707Right-handed alpha
Helix 79
AI7
B
708 713Right-handed alpha
Helix 80
AI8
B
723 746Right-handed alpha
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There are 4 sheets in PDB entry 6L3H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 48first strand
Strand 2
A
39 42anti-parallel
Strand 3
A
138 141parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 72first strand
Strand 2
A
75 76anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 48first strand
Strand 2
B
39 42anti-parallel
Strand 3
B
138 141parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 72first strand
Strand 2
B
75 76anti-parallel
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