Analysis of interatomic Contacts of Structural Units in PDB entry:
6L3R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L3R entry

There are 2 chains in PDB entry 6L3R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 75ARG 742
E
 ALA 75ARG 742
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 6L3R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
75 89Right-handed alpha
Helix 2
AA2
A
93 104Right-handed alpha
Helix 3
AA3
A
117 127Right-handed alpha
Helix 4
AA4
A
127 135Right-handed alpha
Helix 5
AA5
A
136 143Right-handed 310
Helix 6
AA6
A
144 155Right-handed alpha
Helix 7
AA7
A
166 180Right-handed alpha
Helix 8
AA8
A
182 195Right-handed alpha
Helix 9
AA9
A
201 208Right-handed alpha
Helix 10
AB1
A
227 244Right-handed alpha
Helix 11
AB2
A
271 286Right-handed alpha
Helix 12
AB3
A
307 312Right-handed alpha
Helix 13
AB4
A
320 324Right-handed 310
Helix 14
AB5
A
335 344Right-handed alpha
Helix 15
AB6
A
358 362Right-handed 310
Helix 16
AB7
A
363 377Right-handed alpha
Helix 17
AB8
A
386 401Right-handed alpha
Helix 18
AB9
A
408 414Right-handed alpha
Helix 19
AC1
A
417 421Right-handed 310
Helix 20
AC2
A
452 455Right-handed 310
Helix 21
AC3
A
462 484Right-handed alpha
Helix 22
AC4
A
488 499Right-handed alpha
Helix 23
AC5
A
507 515Right-handed alpha
Helix 24
AC6
A
521 551Right-handed alpha
Helix 25
AC7
A
560 564Right-handed 310
Helix 26
AC8
A
566 571Right-handed alpha
Helix 27
AC9
A
580 592Right-handed alpha
Helix 28
AD1
A
604 612Right-handed alpha
Helix 29
AD2
A
638 648Right-handed alpha
Helix 30
AD3
A
654 662Right-handed alpha
Helix 31
AD4
A
673 680Right-handed alpha
Helix 32
AD5
A
682 686Right-handed 310
Helix 33
AD6
A
687 700Right-handed alpha
Helix 34
AD7
A
716 730Right-handed alpha
Helix 35
AD8
E
76 89Right-handed alpha
Helix 36
AD9
E
93 104Right-handed alpha
Helix 37
AE1
E
117 127Right-handed alpha
Helix 38
AE2
E
127 134Right-handed alpha
Helix 39
AE3
E
135 143Right-handed 310
Helix 40
AE4
E
144 155Right-handed alpha
Helix 41
AE5
E
166 180Right-handed alpha
Helix 42
AE6
E
182 195Right-handed alpha
Helix 43
AE7
E
201 208Right-handed alpha
Helix 44
AE8
E
227 244Right-handed alpha
Helix 45
AE9
E
271 286Right-handed alpha
Helix 46
AF1
E
307 312Right-handed alpha
Helix 47
AF2
E
320 324Right-handed 310
Helix 48
AF3
E
335 344Right-handed alpha
Helix 49
AF4
E
358 362Right-handed 310
Helix 50
AF5
E
364 377Right-handed alpha
Helix 51
AF6
E
386 401Right-handed alpha
Helix 52
AF7
E
408 414Right-handed alpha
Helix 53
AF8
E
417 421Right-handed 310
Helix 54
AF9
E
452 455Right-handed 310
Helix 55
AG1
E
462 484Right-handed alpha
Helix 56
AG2
E
488 499Right-handed alpha
Helix 57
AG3
E
507 516Right-handed alpha
Helix 58
AG4
E
521 551Right-handed alpha
Helix 59
AG5
E
560 564Right-handed 310
Helix 60
AG6
E
566 571Right-handed alpha
Helix 61
AG7
E
580 592Right-handed alpha
Helix 62
AG8
E
604 612Right-handed alpha
Helix 63
AG9
E
638 648Right-handed alpha
Helix 64
AH1
E
652 662Right-handed alpha
Helix 65
AH2
E
673 680Right-handed alpha
Helix 66
AH3
E
682 686Right-handed 310
Helix 67
AH4
E
687 700Right-handed alpha
Helix 68
AH5
E
716 730Right-handed alpha
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There are 14 sheets in PDB entry 6L3R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
162 163anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 200first strand
Strand 2
A
446 450anti-parallel
Strand 3
A
502 506parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
442 444first strand
Strand 2
A
218 222anti-parallel
Strand 3
A
247 251parallel
Strand 4
A
297 301parallel
Strand 5
A
329 334parallel
Strand 6
A
404 407parallel
Strand 7
A
734 736anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 262first strand
Strand 2
A
267 268anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 350first strand
Strand 2
A
382 385anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
624 625first strand
Strand 2
A
636 637anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
710 711first strand
Strand 2
A
739 740parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
158 159first strand
Strand 2
E
162 163anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
198 200first strand
Strand 2
E
446 450anti-parallel
Strand 3
E
502 506parallel
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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
442 444first strand
Strand 2
E
218 222anti-parallel
Strand 3
E
247 251parallel
Strand 4
E
297 301parallel
Strand 5
E
329 334parallel
Strand 6
E
404 407parallel
Strand 7
E
734 736anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
261 262first strand
Strand 2
E
267 268anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
347 350first strand
Strand 2
E
382 385anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
624 625first strand
Strand 2
E
636 637anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
710 711first strand
Strand 2
E
739 740parallel
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