Analysis of interatomic Contacts of Structural Units in PDB entry:
6L4H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L4H entry

There are 4 chains in PDB entry 6L4H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 29PRO 317
B
 ASP 29PRO 317
C
 ASP 29PRO 317
D
 ASP 29PRO 317
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 6L4H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
66 76Right-handed alpha
Helix 2
AA2
A
77 87Right-handed alpha
Helix 3
AA3
A
112 118Right-handed alpha
Helix 4
AA4
A
119 127Right-handed alpha
Helix 5
AA5
A
138 151Right-handed alpha
Helix 6
AA6
A
184 194Right-handed alpha
Helix 7
AA7
A
195 202Right-handed alpha
Helix 8
AA8
A
203 216Right-handed alpha
Helix 9
AA9
A
218 231Right-handed alpha
Helix 10
AB1
A
266 275Right-handed alpha
Helix 11
AB2
A
276 277Right-handed 310
Helix 12
AB3
A
278 280Right-handed 310
Helix 13
AB4
A
293 298Right-handed alpha
Helix 14
AB5
A
298 314Right-handed alpha
Helix 15
AB6
B
66 77Right-handed alpha
Helix 16
AB7
B
77 85Right-handed alpha
Helix 17
AB8
B
112 119Right-handed alpha
Helix 18
AB9
B
119 127Right-handed alpha
Helix 19
AC1
B
138 151Right-handed alpha
Helix 20
AC2
B
184 194Right-handed alpha
Helix 21
AC3
B
195 202Right-handed alpha
Helix 22
AC4
B
203 216Right-handed alpha
Helix 23
AC5
B
218 231Right-handed alpha
Helix 24
AC6
B
266 276Right-handed alpha
Helix 25
AC7
B
277 280Right-handed 310
Helix 26
AC8
B
293 298Right-handed alpha
Helix 27
AC9
B
298 313Right-handed alpha
Helix 28
AD1
C
66 71Right-handed alpha
Helix 29
AD2
C
71 77Right-handed alpha
Helix 30
AD3
C
77 87Right-handed alpha
Helix 31
AD4
C
112 118Right-handed alpha
Helix 32
AD5
C
119 127Right-handed alpha
Helix 33
AD6
C
138 151Right-handed alpha
Helix 34
AD7
C
184 194Right-handed alpha
Helix 35
AD8
C
195 202Right-handed alpha
Helix 36
AD9
C
203 216Right-handed alpha
Helix 37
AE1
C
218 231Right-handed alpha
Helix 38
AE2
C
266 276Right-handed alpha
Helix 39
AE3
C
293 298Right-handed alpha
Helix 40
AE4
C
298 314Right-handed alpha
Helix 41
AE5
D
66 77Right-handed alpha
Helix 42
AE6
D
77 87Right-handed alpha
Helix 43
AE7
D
112 119Right-handed alpha
Helix 44
AE8
D
119 127Right-handed alpha
Helix 45
AE9
D
138 151Right-handed alpha
Helix 46
AF1
D
184 194Right-handed alpha
Helix 47
AF2
D
195 202Right-handed alpha
Helix 48
AF3
D
203 217Right-handed alpha
Helix 49
AF4
D
218 232Right-handed alpha
Helix 50
AF5
D
266 277Right-handed alpha
Helix 51
AF6
D
293 298Right-handed alpha
Helix 52
AF7
D
298 312Right-handed alpha
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There are 4 sheets in PDB entry 6L4H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 37first strand
Strand 2
A
40 47anti-parallel
Strand 3
A
89 93anti-parallel
Strand 4
A
56 60parallel
Strand 5
A
132 137parallel
Strand 6
A
155 161parallel
Strand 7
A
255 261parallel
Strand 8
A
282 287parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 37first strand
Strand 2
B
40 47anti-parallel
Strand 3
B
89 93anti-parallel
Strand 4
B
56 60parallel
Strand 5
B
132 137parallel
Strand 6
B
155 161parallel
Strand 7
B
255 261parallel
Strand 8
B
282 287parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 37first strand
Strand 2
C
40 47anti-parallel
Strand 3
C
89 93anti-parallel
Strand 4
C
56 60parallel
Strand 5
C
132 137parallel
Strand 6
C
155 161parallel
Strand 7
C
255 261parallel
Strand 8
C
282 287parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 35first strand
Strand 2
D
42 47anti-parallel
Strand 3
D
89 93anti-parallel
Strand 4
D
56 60parallel
Strand 5
D
132 137parallel
Strand 6
D
155 161parallel
Strand 7
D
255 261parallel
Strand 8
D
282 287parallel
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