Analysis of interatomic Contacts of Structural Units in PDB entry:
6L4O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L4O entry

There are 2 chains in PDB entry 6L4O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2VAL 446
B
 ASP 161ALA 286
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 6L4O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 16Right-handed alpha
Helix 2
AA2
A
24 33Right-handed alpha
Helix 3
AA3
A
34 37Right-handed 310
Helix 4
AA4
A
38 52Right-handed alpha
Helix 5
AA5
A
53 58Right-handed 310
Helix 6
AA6
A
59 72Right-handed alpha
Helix 7
AA7
A
75 84Right-handed alpha
Helix 8
AA8
A
85 90Right-handed 310
Helix 9
AA9
A
91 93Right-handed 310
Helix 10
AB1
A
94 105Right-handed alpha
Helix 11
AB2
A
106 108Right-handed 310
Helix 12
AB3
A
110 128Right-handed alpha
Helix 13
AB4
A
128 143Right-handed alpha
Helix 14
AB5
A
144 159Right-handed alpha
Helix 15
AB6
A
160 162Right-handed 310
Helix 16
AB7
A
168 183Right-handed alpha
Helix 17
AB8
A
184 186Right-handed 310
Helix 18
AB9
A
187 200Right-handed alpha
Helix 19
AC1
A
201 205Right-handed 310
Helix 20
AC2
A
206 222Right-handed alpha
Helix 21
AC3
A
231 244Right-handed alpha
Helix 22
AC4
A
245 249Right-handed 310
Helix 23
AC5
A
255 266Right-handed alpha
Helix 24
AC6
A
267 270Right-handed 310
Helix 25
AC7
A
281 294Right-handed alpha
Helix 26
AC8
A
295 297Right-handed 310
Helix 27
AC9
A
302 316Right-handed alpha
Helix 28
AD1
A
339 354Right-handed alpha
Helix 29
AD2
A
355 357Right-handed 310
Helix 30
AD3
A
358 363Right-handed alpha
Helix 31
AD4
A
366 395Right-handed alpha
Helix 32
AD5
A
401 404Right-handed 310
Helix 33
AD6
A
405 429Right-handed alpha
Helix 34
AD7
B
190 193Right-handed 310
Helix 35
AD8
B
231 234Right-handed 310
Helix 36
AD9
B
268 272Right-handed 310
Helix 37
AE1
B
276 279Right-handed 310
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There are 4 sheets in PDB entry 6L4O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 167first strand
Strand 2
B
281 284anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 176first strand
Strand 2
B
182 185anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 199first strand
Strand 2
B
204 209anti-parallel
Strand 3
B
214 218anti-parallel
Strand 4
B
224 227anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 199first strand
Strand 2
B
204 209anti-parallel
Strand 3
B
236 240anti-parallel
Strand 4
B
246 250anti-parallel
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