Analysis of interatomic Contacts of Structural Units in PDB entry:
6L53


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L53 entry

There is 1 chain in PDB entry 6L53 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 36VAL 3661
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are114 helices in PDB entry 6L53. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 44Right-handed alpha
Helix 2
AA2
A
67 72Right-handed alpha
Helix 3
AA3
A
80 88Right-handed alpha
Helix 4
AA4
A
98 102Right-handed 310
Helix 5
AA5
A
123 142Right-handed alpha
Helix 6
AA6
A
150 152Right-handed 310
Helix 7
AA7
A
153 164Right-handed alpha
Helix 8
AA8
A
170 175Right-handed alpha
Helix 9
AA9
A
178 182Right-handed 310
Helix 10
AB1
A
190 195Right-handed alpha
Helix 11
AB2
A
200 204Right-handed 310
Helix 12
AB3
A
209 217Right-handed alpha
Helix 13
AB4
A
218 220Right-handed 310
Helix 14
AB5
A
229 246Right-handed alpha
Helix 15
AB6
A
251 271Right-handed alpha
Helix 16
AB7
A
278 293Right-handed alpha
Helix 17
AB8
A
301 306Right-handed alpha
Helix 18
AB9
A
306 312Right-handed alpha
Helix 19
AC1
A
313 315Right-handed 310
Helix 20
AC2
A
321 324Right-handed 310
Helix 21
AC3
A
325 331Right-handed alpha
Helix 22
AC4
A
342 356Right-handed alpha
Helix 23
AC5
A
362 367Right-handed alpha
Helix 24
AC6
A
372 376Right-handed 310
Helix 25
AC7
A
388 395Right-handed alpha
Helix 26
AC8
A
398 415Right-handed alpha
Helix 27
AC9
A
420 425Right-handed alpha
Helix 28
AD1
A
444 457Right-handed alpha
Helix 29
AD2
A
458 462Right-handed 310
Helix 30
AD3
A
472 480Right-handed alpha
Helix 31
AD4
A
493 509Right-handed alpha
Helix 32
AD5
A
544 554Right-handed alpha
Helix 33
AD6
A
562 582Right-handed alpha
Helix 34
AD7
A
605 610Right-handed alpha
Helix 35
AD8
A
610 617Right-handed alpha
Helix 36
AD9
A
626 631Right-handed alpha
Helix 37
AE1
A
642 651Right-handed alpha
Helix 38
AE2
A
658 670Right-handed alpha
Helix 39
AE3
A
713 729Right-handed alpha
Helix 40
AE4
A
736 738Right-handed 310
Helix 41
AE5
A
739 747Right-handed alpha
Helix 42
AE6
A
762 770Right-handed alpha
Helix 43
AE7
A
808 822Right-handed alpha
Helix 44
AE8
A
833 850Right-handed alpha
Helix 45
AE9
A
871 890Right-handed alpha
Helix 46
AF1
A
915 922Right-handed alpha
Helix 47
AF2
A
924 929Right-handed alpha
Helix 48
AF3
A
937 948Right-handed alpha
Helix 49
AF4
A
972 985Right-handed alpha
Helix 50
AF5
A
990 998Right-handed 310
Helix 51
AF6
A
1010 1016Right-handed alpha
Helix 52
AF7
A
1027 1033Right-handed alpha
Helix 53
AF8
A
1073 1078Right-handed alpha
Helix 54
AF9
A
1079 1085Right-handed alpha
Helix 55
AG1
A
1085 1090Right-handed alpha
Helix 56
AG2
A
1091 1106Right-handed alpha
Helix 57
AG3
A
1114 1120Right-handed alpha
Helix 58
AG4
A
1125 1133Right-handed alpha
Helix 59
AG5
A
1195 1200Right-handed alpha
Helix 60
AG6
A
1203 1215Right-handed alpha
Helix 61
AG7
A
1282 1297Right-handed alpha
Helix 62
AG8
A
1297 1302Right-handed alpha
Helix 63
AG9
A
1303 1305Right-handed 310
Helix 64
AH1
A
1316 1331Right-handed alpha
Helix 65
AH2
A
1350 1355Right-handed alpha
Helix 66
AH3
A
1358 1368Right-handed alpha
Helix 67
AH4
A
1400 1411Right-handed alpha
Helix 68
AH5
A
1417 1420Right-handed 310
Helix 69
AH6
A
1421 1428Right-handed alpha
Helix 70
AH7
A
1437 1442Right-handed alpha
Helix 71
AH8
A
1452 1464Right-handed alpha
Helix 72
AH9
A
1467 1479Right-handed alpha
Helix 73
AI1
A
1480 1484Right-handed 310
Helix 74
AI2
A
1488 1497Right-handed alpha
Helix 75
AI3
A
1507 1517Right-handed alpha
Helix 76
AI4
A
1523 1533Right-handed alpha
Helix 77
AI5
A
1534 1538Right-handed 310
Helix 78
AI6
A
1599 1608Right-handed alpha
Helix 79
AI7
A
1617 1632Right-handed alpha
Helix 80
AI8
A
1633 1638Right-handed alpha
Helix 81
AI9
A
1644 1655Right-handed alpha
Helix 82
AJ1
A
1660 1675Right-handed alpha
Helix 83
AJ2
A
1703 1708Right-handed alpha
Helix 84
AJ3
A
1708 1713Right-handed alpha
Helix 85
AJ4
A
1729 1738Right-handed alpha
Helix 86
AJ5
A
1744 1759Right-handed alpha
Helix 87
AJ6
A
1785 1797Right-handed alpha
Helix 88
AJ7
A
1803 1812Right-handed alpha
Helix 89
AJ8
A
1825 1830Right-handed alpha
Helix 90
AJ9
A
1837 1851Right-handed alpha
Helix 91
AK1
A
1860 1866Right-handed alpha
Helix 92
AK2
A
1927 1940Right-handed alpha
Helix 93
AK3
A
1941 1958Right-handed alpha
Helix 94
AK4
A
1965 1971Right-handed alpha
Helix 95
AK5
A
1975 1991Right-handed alpha
Helix 96
AK6
A
2014 2027Right-handed alpha
Helix 97
AK7
A
2040 2045Right-handed alpha
Helix 98
AK8
A
2072 2080Right-handed alpha
Helix 99
AK9
A
2096 2101Right-handed 310
Helix 100
AL1
A
2161 2175Right-handed alpha
Helix 101
AL2
A
2176 2180Right-handed 310
Helix 102
AL3
A
2215 2231Right-handed alpha
Helix 103
AL4
A
2252 2258Right-handed alpha
Helix 104
AL5
A
2279 2289Right-handed alpha
Helix 105
AL6
A
2296 2301Right-handed alpha
Helix 106
AL7
A
2308 2331Right-handed alpha
Helix 107
AL8
A
2360 2364Right-handed 310
Helix 108
AL9
A
2377 2382Right-handed alpha
Helix 109
AM1
A
2391 2396Right-handed alpha
Helix 110
AM2
A
2396 2406Right-handed alpha
Helix 111
AM3
A
2407 2419Right-handed alpha
Helix 112
AM4
A
3608 3621Right-handed alpha
Helix 113
AM5
A
3632 3645Right-handed alpha
Helix 114
AM6
A
3654 3658Right-handed 310
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There are 2 sheets in PDB entry 6L53. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2138 2140first strand
Strand 2
A
2152 2156anti-parallel
Strand 3
A
2202 2206anti-parallel
Strand 4
A
2195 2197anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2212 2213first strand
Strand 2
A
2342 2343anti-parallel
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