Analysis of interatomic Contacts of Structural Units in PDB entry:
6L57


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L57 entry

There are 2 chains in PDB entry 6L57 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 4ASP 339
B
 ARG 15VAL 346
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 6L57. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 30Right-handed alpha
Helix 2
AA2
A
54 65Right-handed alpha
Helix 3
AA3
A
82 92Right-handed alpha
Helix 4
AA4
A
123 127Right-handed 310
Helix 5
AA5
A
146 163Right-handed alpha
Helix 6
AA6
A
179 195Right-handed alpha
Helix 7
AA7
A
205 213Right-handed alpha
Helix 8
AA8
A
215 219Right-handed 310
Helix 9
AA9
A
225 240Right-handed alpha
Helix 10
AB1
A
242 246Right-handed 310
Helix 11
AB2
A
277 292Right-handed alpha
Helix 12
AB3
A
293 311Right-handed alpha
Helix 13
AB4
A
315 319Right-handed 310
Helix 14
AB5
A
323 338Right-handed alpha
Helix 15
AB6
B
26 41Right-handed alpha
Helix 16
AB7
B
58 72Right-handed alpha
Helix 17
AB8
B
91 100Right-handed alpha
Helix 18
AB9
B
132 136Right-handed 310
Helix 19
AC1
B
155 172Right-handed alpha
Helix 20
AC2
B
188 202Right-handed alpha
Helix 21
AC3
B
214 222Right-handed alpha
Helix 22
AC4
B
224 228Right-handed 310
Helix 23
AC5
B
234 250Right-handed alpha
Helix 24
AC6
B
275 279Right-handed 310
Helix 25
AC7
B
286 300Right-handed alpha
Helix 26
AC8
B
302 319Right-handed alpha
Helix 27
AC9
B
320 323Right-handed 310
Helix 28
AD1
B
324 328Right-handed 310
Helix 29
AD2
B
332 344Right-handed alpha
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There are 3 sheets in PDB entry 6L57. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 38first strand
Strand 2
A
5 10parallel
Strand 3
A
66 69parallel
Strand 4
A
257 260parallel
Strand 5
A
249 251anti-parallel
Strand 6
A
95 101anti-parallel
Strand 7
A
114 120anti-parallel
Strand 8
A
221 224parallel
Strand 9
A
167 172parallel
Strand 10
A
199 204parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 134first strand
Strand 2
A
137 145anti-parallel
Strand 3
B
146 154anti-parallel
Strand 4
B
139 141anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 49first strand
Strand 2
B
16 21parallel
Strand 3
B
73 76parallel
Strand 4
B
265 269parallel
Strand 5
B
256 260anti-parallel
Strand 6
B
104 110anti-parallel
Strand 7
B
123 129anti-parallel
Strand 8
B
230 233parallel
Strand 9
B
176 181parallel
Strand 10
B
208 213parallel
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