Analysis of interatomic Contacts of Structural Units in PDB entry:
6L5L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L5L entry

There is 1 chain in PDB entry 6L5L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 188ILE 558
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6L5L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
194 203Right-handed alpha
Helix 2
AA2
A
210 222Right-handed alpha
Helix 3
AA3
A
233 251Right-handed alpha
Helix 4
AA4
A
269 284Right-handed alpha
Helix 5
AA5
A
298 308Right-handed alpha
Helix 6
AA6
A
315 325Right-handed alpha
Helix 7
AA7
A
340 347Right-handed alpha
Helix 8
AA8
A
349 361Right-handed alpha
Helix 9
AA9
A
379 389Right-handed alpha
Helix 10
AB1
A
414 416Right-handed 310
Helix 11
AB2
A
417 430Right-handed alpha
Helix 12
AB3
A
442 452Right-handed alpha
Helix 13
AB4
A
467 480Right-handed alpha
Helix 14
AB5
A
512 522Right-handed alpha
Helix 15
AB6
A
537 539Right-handed 310
Helix 16
AB7
A
540 552Right-handed alpha
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There are 2 sheets in PDB entry 6L5L. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 292first strand
Strand 2
A
311 314parallel
Strand 3
A
263 266parallel
Strand 4
A
335 338parallel
Strand 5
A
370 375parallel
Strand 6
A
226 229parallel
Strand 7
A
395 397parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
459 462first strand
Strand 2
A
485 489parallel
Strand 3
A
436 440parallel
Strand 4
A
503 506parallel
Strand 5
A
530 536parallel
Strand 6
A
406 412parallel
Strand 7
A
556 558parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il