Analysis of interatomic Contacts of Structural Units in PDB entry:
6L5N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L5N entry

There are 4 chains in PDB entry 6L5N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 187ILE 563
B
 SER 187ILE 563
C
 U 1 U 7
D
 U 1 U 7
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6L5N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
194 204Right-handed alpha
Helix 2
AA2
A
210 222Right-handed alpha
Helix 3
AA3
A
235 250Right-handed alpha
Helix 4
AA4
A
269 282Right-handed alpha
Helix 5
AA5
A
297 308Right-handed alpha
Helix 6
AA6
A
315 325Right-handed alpha
Helix 7
AA7
A
340 345Right-handed alpha
Helix 8
AA8
A
349 358Right-handed alpha
Helix 9
AA9
A
379 387Right-handed alpha
Helix 10
AB1
A
388 390Right-handed 310
Helix 11
AB2
A
419 435Right-handed alpha
Helix 12
AB3
A
447 457Right-handed alpha
Helix 13
AB4
A
460 462Right-handed 310
Helix 14
AB5
A
472 485Right-handed alpha
Helix 15
AB6
A
495 498Right-handed 310
Helix 16
AB7
A
517 526Right-handed alpha
Helix 17
AB8
A
542 544Right-handed 310
Helix 18
AB9
A
545 557Right-handed alpha
Helix 19
AC1
B
194 204Right-handed alpha
Helix 20
AC2
B
210 223Right-handed alpha
Helix 21
AC3
B
235 250Right-handed alpha
Helix 22
AC4
B
269 283Right-handed alpha
Helix 23
AC5
B
297 308Right-handed alpha
Helix 24
AC6
B
315 325Right-handed alpha
Helix 25
AC7
B
340 345Right-handed alpha
Helix 26
AC8
B
346 358Right-handed alpha
Helix 27
AC9
B
381 387Right-handed alpha
Helix 28
AD1
B
388 390Right-handed 310
Helix 29
AD2
B
422 435Right-handed alpha
Helix 30
AD3
B
447 457Right-handed alpha
Helix 31
AD4
B
460 462Right-handed 310
Helix 32
AD5
B
472 486Right-handed alpha
Helix 33
AD6
B
495 498Right-handed 310
Helix 34
AD7
B
517 526Right-handed alpha
Helix 35
AD8
B
527 528Right-handed 310
Helix 36
AD9
B
529 533Right-handed 310
Helix 37
AE1
B
542 544Right-handed 310
Helix 38
AE2
B
545 557Right-handed alpha
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There are 4 sheets in PDB entry 6L5N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 292first strand
Strand 2
A
311 314parallel
Strand 3
A
263 266parallel
Strand 4
A
335 338parallel
Strand 5
A
370 375parallel
Strand 6
A
226 229parallel
Strand 7
A
395 398parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 467first strand
Strand 2
A
490 493parallel
Strand 3
A
440 444parallel
Strand 4
A
506 511parallel
Strand 5
A
535 541parallel
Strand 6
A
411 417parallel
Strand 7
A
561 562parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
289 292first strand
Strand 2
B
311 314parallel
Strand 3
B
263 266parallel
Strand 4
B
335 339parallel
Strand 5
B
370 375parallel
Strand 6
B
226 229parallel
Strand 7
B
395 398parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
464 467first strand
Strand 2
B
490 493parallel
Strand 3
B
440 444parallel
Strand 4
B
506 511parallel
Strand 5
B
535 541parallel
Strand 6
B
411 417parallel
Strand 7
B
561 563parallel
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