Analysis of interatomic Contacts of Structural Units in PDB entry:
6L5O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L5O entry

There is 1 chain in PDB entry 6L5O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 187ILE 563
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6L5O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
194 204Right-handed alpha
Helix 2
AA2
A
210 222Right-handed alpha
Helix 3
AA3
A
235 252Right-handed alpha
Helix 4
AA4
A
269 284Right-handed alpha
Helix 5
AA5
A
297 308Right-handed alpha
Helix 6
AA6
A
315 325Right-handed alpha
Helix 7
AA7
A
340 347Right-handed alpha
Helix 8
AA8
A
349 361Right-handed alpha
Helix 9
AA9
A
364 368Right-handed 310
Helix 10
AB1
A
379 387Right-handed alpha
Helix 11
AB2
A
388 390Right-handed 310
Helix 12
AB3
A
419 421Right-handed 310
Helix 13
AB4
A
422 435Right-handed alpha
Helix 14
AB5
A
447 457Right-handed alpha
Helix 15
AB6
A
460 462Right-handed 310
Helix 16
AB7
A
472 485Right-handed alpha
Helix 17
AB8
A
495 499Right-handed alpha
Helix 18
AB9
A
517 526Right-handed alpha
Helix 19
AC1
A
542 544Right-handed 310
Helix 20
AC2
A
545 557Right-handed alpha
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There are 2 sheets in PDB entry 6L5O. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 292first strand
Strand 2
A
311 314parallel
Strand 3
A
263 266parallel
Strand 4
A
335 339parallel
Strand 5
A
370 375parallel
Strand 6
A
226 229parallel
Strand 7
A
395 398parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 467first strand
Strand 2
A
490 494parallel
Strand 3
A
441 445parallel
Strand 4
A
508 511parallel
Strand 5
A
535 541parallel
Strand 6
A
411 417parallel
Strand 7
A
561 563parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il