Analysis of interatomic Contacts of Structural Units in PDB entry:
6L5P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L5P entry

There is 1 chain in PDB entry 6L5P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 16LYS 469
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6L5P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 41Right-handed alpha
Helix 2
AA2
A
55 69Right-handed alpha
Helix 3
AA3
A
93 100Right-handed alpha
Helix 4
AA4
A
101 103Right-handed 310
Helix 5
AA5
A
104 111Right-handed alpha
Helix 6
AA6
A
125 135Right-handed alpha
Helix 7
AA7
A
147 163Right-handed alpha
Helix 8
AA8
A
186 188Right-handed 310
Helix 9
AA9
A
189 193Right-handed 310
Helix 10
AB1
A
197 207Right-handed alpha
Helix 11
AB2
A
208 213Right-handed 310
Helix 12
AB3
A
225 234Right-handed alpha
Helix 13
AB4
A
263 271Right-handed alpha
Helix 14
AB5
A
289 303Right-handed alpha
Helix 15
AB6
A
329 339Right-handed alpha
Helix 16
AB7
A
350 357Right-handed alpha
Helix 17
AB8
A
368 379Right-handed alpha
Helix 18
AB9
A
390 401Right-handed alpha
Helix 19
AC1
A
408 411Right-handed 310
Helix 20
AC2
A
419 433Right-handed alpha
Helix 21
AC3
A
434 450Right-handed alpha
Helix 22
AC4
A
455 468Right-handed alpha
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There are 3 sheets in PDB entry 6L5P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 78first strand
Strand 2
A
45 51parallel
Strand 3
A
17 20parallel
Strand 4
A
118 122parallel
Strand 5
A
140 144parallel
Strand 6
A
216 218parallel
Strand 7
A
244 246parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 173first strand
Strand 2
A
183 184anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
342 345first strand
Strand 2
A
307 310parallel
Strand 3
A
277 281parallel
Strand 4
A
360 365parallel
Strand 5
A
381 384parallel
Strand 6
A
404 406parallel
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