Analysis of interatomic Contacts of Structural Units in PDB entry:
6L69


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L69 entry

There are 2 chains in PDB entry 6L69 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3GLY 400
B
 THR 3GLY 400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 6L69. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 24Right-handed alpha
Helix 2
AA2
A
43 52Right-handed alpha
Helix 3
AA3
A
59 62Right-handed 310
Helix 4
AA4
A
63 68Right-handed alpha
Helix 5
AA5
A
77 82Right-handed alpha
Helix 6
AA6
A
86 90Right-handed 310
Helix 7
AA7
A
91 106Right-handed alpha
Helix 8
AA8
A
107 112Right-handed alpha
Helix 9
AA9
A
114 128Right-handed alpha
Helix 10
AB1
A
136 140Right-handed alpha
Helix 11
AB2
A
142 154Right-handed alpha
Helix 12
AB3
A
156 158Right-handed 310
Helix 13
AB4
A
159 172Right-handed alpha
Helix 14
AB5
A
176 201Right-handed alpha
Helix 15
AB6
A
205 217Right-handed alpha
Helix 16
AB7
A
221 254Right-handed alpha
Helix 17
AB8
A
254 263Right-handed alpha
Helix 18
AB9
A
267 279Right-handed alpha
Helix 19
AC1
A
310 316Right-handed alpha
Helix 20
AC2
A
317 322Right-handed alpha
Helix 21
AC3
A
350 369Right-handed alpha
Helix 22
AC4
A
377 381Right-handed 310
Helix 23
AC5
B
13 24Right-handed alpha
Helix 24
AC6
B
43 52Right-handed alpha
Helix 25
AC7
B
59 62Right-handed 310
Helix 26
AC8
B
63 68Right-handed alpha
Helix 27
AC9
B
77 82Right-handed alpha
Helix 28
AD1
B
86 90Right-handed 310
Helix 29
AD2
B
91 106Right-handed alpha
Helix 30
AD3
B
107 112Right-handed alpha
Helix 31
AD4
B
114 128Right-handed alpha
Helix 32
AD5
B
136 140Right-handed alpha
Helix 33
AD6
B
142 154Right-handed alpha
Helix 34
AD7
B
156 158Right-handed 310
Helix 35
AD8
B
159 172Right-handed alpha
Helix 36
AD9
B
176 201Right-handed alpha
Helix 37
AE1
B
205 217Right-handed alpha
Helix 38
AE2
B
221 254Right-handed alpha
Helix 39
AE3
B
254 263Right-handed alpha
Helix 40
AE4
B
267 279Right-handed alpha
Helix 41
AE5
B
310 316Right-handed alpha
Helix 42
AE6
B
317 322Right-handed alpha
Helix 43
AE7
B
350 369Right-handed alpha
Helix 44
AE8
B
377 381Right-handed 310
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There are 6 sheets in PDB entry 6L69. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 6first strand
Strand 2
A
27 32parallel
Strand 3
A
36 41anti-parallel
Strand 4
A
306 309parallel
Strand 5
A
285 290anti-parallel
Strand 6
A
56 57anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 135first strand
Strand 2
A
396 398anti-parallel
Strand 3
A
373 374anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
294 296first strand
Strand 2
A
299 301anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 6first strand
Strand 2
B
27 32parallel
Strand 3
B
36 41anti-parallel
Strand 4
B
306 309parallel
Strand 5
B
285 290anti-parallel
Strand 6
B
56 57anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 135first strand
Strand 2
B
396 398anti-parallel
Strand 3
B
373 374anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
294 296first strand
Strand 2
B
299 301anti-parallel
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