Analysis of interatomic Contacts of Structural Units in PDB entry:
6L6F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6L6F entry

There are 4 chains in PDB entry 6L6F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 3	VAL 809
B	HIS 3	VAL 809
C	HIS 3	VAL 809
D	HIS 3	VAL 809

There are106 helices in PDB entry 6L6F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	25	39	Right-handed alpha
Helix 2	AA2	A	59	74	Right-handed alpha
Helix 3	AA3	A	83	97	Right-handed alpha
Helix 4	AA4	A	124	140	Right-handed alpha
Helix 5	AA5	A	151	156	Right-handed alpha
Helix 6	AA6	A	183	191	Right-handed alpha
Helix 7	AA7	A	203	217	Right-handed alpha
Helix 8	AA8	A	238	243	Right-handed alpha
Helix 9	AA9	A	258	272	Right-handed alpha
Helix 10	AB1	A	289	308	Right-handed alpha
Helix 11	AB2	A	327	337	Right-handed alpha
Helix 12	AB3	A	426	429	Right-handed 310
Helix 13	AB4	A	433	447	Right-handed alpha
Helix 14	AB5	A	470	478	Right-handed alpha
Helix 15	AB6	A	491	498	Right-handed alpha
Helix 16	AB7	A	536	553	Right-handed alpha
Helix 17	AB8	A	603	634	Right-handed alpha
Helix 18	AB9	A	641	648	Right-handed alpha
Helix 19	AC1	A	659	668	Right-handed alpha
Helix 20	AC2	A	670	683	Right-handed alpha
Helix 21	AC3	A	691	701	Right-handed alpha
Helix 22	AC4	A	709	719	Right-handed alpha
Helix 23	AC5	A	743	756	Right-handed alpha
Helix 24	AC6	A	759	770	Right-handed alpha
Helix 25	AC7	A	790	800	Right-handed alpha
Helix 26	AC8	B	23	39	Right-handed alpha
Helix 27	AC9	B	59	74	Right-handed alpha
Helix 28	AD1	B	84	97	Right-handed alpha
Helix 29	AD2	B	125	140	Right-handed alpha
Helix 30	AD3	B	157	162	Right-handed alpha
Helix 31	AD4	B	162	167	Right-handed alpha
Helix 32	AD5	B	183	194	Right-handed alpha
Helix 33	AD6	B	203	217	Right-handed alpha
Helix 34	AD7	B	239	244	Right-handed alpha
Helix 35	AD8	B	258	271	Right-handed alpha
Helix 36	AD9	B	289	307	Right-handed alpha
Helix 37	AE1	B	326	336	Right-handed alpha
Helix 38	AE2	B	434	446	Right-handed alpha
Helix 39	AE3	B	471	478	Right-handed alpha
Helix 40	AE4	B	491	498	Right-handed alpha
Helix 41	AE5	B	521	526	Right-handed 310
Helix 42	AE6	B	533	554	Right-handed alpha
Helix 43	AE7	B	603	635	Right-handed alpha
Helix 44	AE8	B	642	648	Right-handed alpha
Helix 45	AE9	B	659	667	Right-handed alpha
Helix 46	AF1	B	670	683	Right-handed alpha
Helix 47	AF2	B	690	701	Right-handed alpha
Helix 48	AF3	B	708	719	Right-handed alpha
Helix 49	AF4	B	743	756	Right-handed alpha
Helix 50	AF5	B	759	769	Right-handed alpha
Helix 51	AF6	B	794	805	Right-handed alpha
Helix 52	AF7	C	15	19	Right-handed 310
Helix 53	AF8	C	23	39	Right-handed alpha
Helix 54	AF9	C	59	74	Right-handed alpha
Helix 55	AG1	C	83	97	Right-handed alpha
Helix 56	AG2	C	124	140	Right-handed alpha
Helix 57	AG3	C	150	157	Right-handed alpha
Helix 58	AG4	C	157	162	Right-handed alpha
Helix 59	AG5	C	163	166	Right-handed 310
Helix 60	AG6	C	183	194	Right-handed alpha
Helix 61	AG7	C	203	217	Right-handed alpha
Helix 62	AG8	C	238	243	Right-handed alpha
Helix 63	AG9	C	258	270	Right-handed alpha
Helix 64	AH1	C	289	309	Right-handed alpha
Helix 65	AH2	C	327	337	Right-handed alpha
Helix 66	AH3	C	433	447	Right-handed alpha
Helix 67	AH4	C	470	478	Right-handed alpha
Helix 68	AH5	C	491	496	Right-handed alpha
Helix 69	AH6	C	532	546	Right-handed alpha
Helix 70	AH7	C	604	634	Right-handed alpha
Helix 71	AH8	C	642	648	Right-handed alpha
Helix 72	AH9	C	659	668	Right-handed alpha
Helix 73	AI1	C	670	683	Right-handed alpha
Helix 74	AI2	C	690	701	Right-handed alpha
Helix 75	AI3	C	709	719	Right-handed alpha
Helix 76	AI4	C	742	758	Right-handed alpha
Helix 77	AI5	C	759	770	Right-handed alpha
Helix 78	AI6	C	791	796	Right-handed 310
Helix 79	AI7	C	797	802	Right-handed alpha
Helix 80	AI8	D	23	39	Right-handed alpha
Helix 81	AI9	D	59	74	Right-handed alpha
Helix 82	AJ1	D	83	97	Right-handed alpha
Helix 83	AJ2	D	124	140	Right-handed alpha
Helix 84	AJ3	D	154	161	Right-handed 310
Helix 85	AJ4	D	183	194	Right-handed alpha
Helix 86	AJ5	D	203	217	Right-handed alpha
Helix 87	AJ6	D	232	236	Right-handed 310
Helix 88	AJ7	D	238	243	Right-handed alpha
Helix 89	AJ8	D	258	272	Right-handed alpha
Helix 90	AJ9	D	289	308	Right-handed alpha
Helix 91	AK1	D	327	337	Right-handed alpha
Helix 92	AK2	D	426	429	Right-handed 310
Helix 93	AK3	D	433	447	Right-handed alpha
Helix 94	AK4	D	470	478	Right-handed alpha
Helix 95	AK5	D	491	498	Right-handed alpha
Helix 96	AK6	D	522	526	Right-handed 310
Helix 97	AK7	D	531	552	Right-handed alpha
Helix 98	AK8	D	603	635	Right-handed alpha
Helix 99	AK9	D	659	668	Right-handed alpha
Helix 100	AL1	D	670	683	Right-handed alpha
Helix 101	AL2	D	690	701	Right-handed alpha
Helix 102	AL3	D	709	719	Right-handed alpha
Helix 103	AL4	D	743	759	Right-handed alpha
Helix 104	AL5	D	759	770	Right-handed alpha
Helix 105	AL6	D	788	793	Right-handed 310
Helix 106	AL7	D	799	806	Right-handed alpha

There are 36 sheets in PDB entry 6L6F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	13	first strand
Strand 2	A	47	56	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	175	first strand
Strand 2	A	145	148	parallel
Strand 3	A	198	200	parallel
Strand 4	A	225	228	parallel
Strand 5	A	247	252	parallel
Strand 6	A	361	366	anti-parallel
Strand 7	A	371	377	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	342	first strand
Strand 2	A	345	348	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	449	454	first strand
Strand 2	A	404	409	parallel
Strand 3	A	483	485	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	417	418	first strand
Strand 2	A	431	432	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	488	490	first strand
Strand 2	A	732	735	anti-parallel
Strand 3	A	505	507	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	499	500	first strand
Strand 2	A	737	738	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	705	708	first strand
Strand 2	A	509	514	anti-parallel
Strand 3	A	722	725	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	655	656	first strand
Strand 2	A	687	688	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	7	first strand
Strand 2	B	47	50	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	103	first strand
Strand 2	B	118	120	parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	173	175	first strand
Strand 2	B	145	148	parallel
Strand 3	B	198	200	parallel
Strand 4	B	225	228	parallel
Strand 5	B	247	252	parallel
Strand 6	B	361	367	anti-parallel
Strand 7	B	370	378	anti-parallel
Strand 8	B	382	383	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	340	342	first strand
Strand 2	B	345	347	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	404	409	first strand
Strand 2	B	449	454	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	416	418	first strand
Strand 2	B	431	433	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	484	489	first strand
Strand 2	B	734	737	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	652	654	first strand
Strand 2	B	703	707	parallel
Strand 3	B	510	514	anti-parallel
Strand 4	B	722	725	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	5	first strand
Strand 2	C	47	48	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	13	first strand
Strand 2	C	53	56	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	173	175	first strand
Strand 2	C	145	148	parallel
Strand 3	C	198	200	parallel
Strand 4	C	227	228	parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	249	252	first strand
Strand 2	C	361	365	anti-parallel
Strand 3	C	372	378	anti-parallel
Strand 4	C	382	384	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	342	first strand
Strand 2	C	345	350	anti-parallel
Strand 3	C	355	358	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	405	409	first strand
Strand 2	C	450	454	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	417	418	first strand
Strand 2	C	431	432	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	488	489	first strand
Strand 2	C	732	738	anti-parallel
Strand 3	C	499	501	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	488	489	first strand
Strand 2	C	732	738	anti-parallel
Strand 3	C	506	507	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	652	655	first strand
Strand 2	C	703	708	parallel
Strand 3	C	509	514	anti-parallel
Strand 4	C	722	725	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	56	first strand
Strand 2	D	4	13	parallel
Strand 3	D	78	79	parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	170	175	first strand
Strand 2	D	143	148	parallel
Strand 3	D	197	201	parallel
Strand 4	D	225	228	parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	248	252	first strand
Strand 2	D	361	366	anti-parallel
Strand 3	D	373	377	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	340	342	first strand
Strand 2	D	345	347	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	449	452	first strand
Strand 2	D	404	409	parallel
Strand 3	D	483	485	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	417	418	first strand
Strand 2	D	431	432	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	499	500	first strand
Strand 2	D	737	738	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	505	506	first strand
Strand 2	D	733	734	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	652	655	first strand
Strand 2	D	703	708	parallel
Strand 3	D	509	514	anti-parallel
Strand 4	D	722	728	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6L6F

Analysis of interatomic Contacts of Structural Units in PDB entry:
6L6F