Analysis of interatomic Contacts of Structural Units in PDB entry:
6L6H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L6H entry

There are 2 chains in PDB entry 6L6H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 25LEU 288
B
 THR 25LEU 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6L6H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 57Right-handed alpha
Helix 2
AA2
A
80 92Right-handed alpha
Helix 3
AA3
A
93 96Right-handed 310
Helix 4
AA4
A
133 148Right-handed alpha
Helix 5
AA5
A
199 215Right-handed alpha
Helix 6
AA6
A
219 231Right-handed alpha
Helix 7
AA7
A
234 246Right-handed alpha
Helix 8
AA8
A
278 282Right-handed alpha
Helix 9
AA9
B
52 57Right-handed alpha
Helix 10
AB1
B
80 92Right-handed alpha
Helix 11
AB2
B
93 96Right-handed 310
Helix 12
AB3
B
133 148Right-handed alpha
Helix 13
AB4
B
199 215Right-handed alpha
Helix 14
AB5
B
219 231Right-handed alpha
Helix 15
AB6
B
234 246Right-handed alpha
Helix 16
AB7
B
278 282Right-handed alpha
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There are 6 sheets in PDB entry 6L6H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 30first strand
Strand 2
A
272 277anti-parallel
Strand 3
A
248 258anti-parallel
Strand 4
A
165 176anti-parallel
Strand 5
A
185 197anti-parallel
Strand 6
B
185 197anti-parallel
Strand 7
B
160 176anti-parallel
Strand 8
B
66 73anti-parallel
Strand 9
B
120 131anti-parallel
Strand 10
B
101 111anti-parallel
Strand 11
B
39 45anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 266first strand
Strand 2
A
248 258anti-parallel
Strand 3
A
165 176anti-parallel
Strand 4
A
185 197anti-parallel
Strand 5
B
185 197anti-parallel
Strand 6
B
160 176anti-parallel
Strand 7
B
248 259anti-parallel
Strand 8
B
272 277anti-parallel
Strand 9
B
27 30anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 45first strand
Strand 2
B
101 111anti-parallel
Strand 3
B
120 131anti-parallel
Strand 4
B
66 73anti-parallel
Strand 5
B
160 176anti-parallel
Strand 6
B
248 259anti-parallel
Strand 7
B
265 266anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 45first strand
Strand 2
A
101 111anti-parallel
Strand 3
A
120 131anti-parallel
Strand 4
A
66 73anti-parallel
Strand 5
A
161 162anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 152first strand
Strand 2
A
156 157anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 152first strand
Strand 2
B
156 157anti-parallel
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