Analysis of interatomic Contacts of Structural Units in PDB entry:
6L6M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L6M entry

There are 4 chains in PDB entry 6L6M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 60ILE 163
B
 THR 60VAL 164
C
 THR 60VAL 164
D
 THR 60VAL 164
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page
There are no helices in PDB entry 6L6M

There are 8 sheets in PDB entry 6L6M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 163first strand
Strand 2
A
138 141parallel
Strand 3
A
147 151anti-parallel
Strand 4
A
73 78anti-parallel
Strand 5
A
65 69anti-parallel
Strand 6
C
111 115anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 127first strand
Strand 2
A
96 103anti-parallel
Strand 3
A
89 93anti-parallel
Strand 4
B
158 159anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 115first strand
Strand 2
C
65 69anti-parallel
Strand 3
C
73 79anti-parallel
Strand 4
C
145 151anti-parallel
Strand 5
C
138 142anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
B
88 93anti-parallel
Strand 3
B
96 103anti-parallel
Strand 4
B
120 127anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 142first strand
Strand 2
B
145 151anti-parallel
Strand 3
B
73 79anti-parallel
Strand 4
B
65 69anti-parallel
Strand 5
D
111 115anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 115first strand
Strand 2
D
65 69anti-parallel
Strand 3
D
73 79anti-parallel
Strand 4
D
145 151anti-parallel
Strand 5
D
138 142anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
89 92first strand
Strand 2
C
96 103anti-parallel
Strand 3
C
120 127anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
89 93first strand
Strand 2
D
96 103anti-parallel
Strand 3
D
120 127anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il