Analysis of interatomic Contacts of Structural Units in PDB entry:
6L7I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6L7I entry

There are 8 chains in PDB entry 6L7I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 2327	LYS 2516
B	ARG 2327	LYS 2516
C	ARG 2327	LYS 2516
D	ARG 2327	LYS 2516
E	ARG 2327	LYS 2516
F	PHE 7	ALA 1472
G	SER 3	LEU 664
H	ALA 665	GLU 680

There are 47 helices in PDB entry 6L7I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2337	2342	Right-handed alpha
Helix 2	AA2	A	2352	2363	Right-handed alpha
Helix 3	AA3	A	2397	2401	Right-handed 310
Helix 4	AA4	A	2403	2407	Right-handed 310
Helix 5	AA5	A	2497	2502	Right-handed alpha
Helix 6	AA6	B	2337	2342	Right-handed alpha
Helix 7	AA7	B	2352	2363	Right-handed alpha
Helix 8	AA8	B	2394	2396	Right-handed 310
Helix 9	AA9	B	2397	2402	Right-handed 310
Helix 10	AB1	B	2497	2502	Right-handed alpha
Helix 11	AB2	C	2337	2342	Right-handed alpha
Helix 12	AB3	C	2352	2363	Right-handed alpha
Helix 13	AB4	C	2397	2401	Right-handed 310
Helix 14	AB5	D	2337	2343	Right-handed alpha
Helix 15	AB6	D	2352	2363	Right-handed alpha
Helix 16	AB7	D	2397	2401	Right-handed 310
Helix 17	AB8	D	2497	2502	Right-handed alpha
Helix 18	AB9	E	2337	2343	Right-handed alpha
Helix 19	AC1	E	2352	2364	Right-handed alpha
Helix 20	AC2	E	2397	2401	Right-handed 310
Helix 21	AC3	E	2403	2407	Right-handed 310
Helix 22	AC4	E	2497	2503	Right-handed alpha
Helix 23	AC5	F	176	178	Right-handed 310
Helix 24	AC6	F	219	226	Right-handed alpha
Helix 25	AC7	F	319	324	Right-handed alpha
Helix 26	AC8	F	501	504	Right-handed 310
Helix 27	AC9	F	612	614	Right-handed 310
Helix 28	AD1	F	723	735	Right-handed alpha
Helix 29	AD2	F	820	825	Right-handed alpha
Helix 30	AD3	F	826	830	Right-handed 310
Helix 31	AD4	F	865	871	Right-handed alpha
Helix 32	AD5	F	975	979	Right-handed 310
Helix 33	AD6	F	1034	1039	Right-handed alpha
Helix 34	AD7	F	1090	1095	Right-handed 310
Helix 35	AD8	F	1103	1111	Right-handed alpha
Helix 36	AD9	F	1242	1248	Right-handed alpha
Helix 37	AE1	F	1263	1267	Right-handed 310
Helix 38	AE2	F	1271	1276	Right-handed alpha
Helix 39	AE3	F	1279	1288	Right-handed alpha
Helix 40	AE4	F	1299	1310	Right-handed alpha
Helix 41	AE5	F	1314	1322	Right-handed alpha
Helix 42	AE6	F	1421	1428	Right-handed alpha
Helix 43	AE7	G	5	9	Right-handed 310
Helix 44	AE8	G	59	65	Right-handed alpha
Helix 45	AE9	G	149	155	Right-handed alpha
Helix 46	AF1	G	440	444	Right-handed 310
Helix 47	AF2	H	669	673	Right-handed 310

There are 34 sheets in PDB entry 6L7I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2329	2336	first strand
Strand 2	A	2508	2515	anti-parallel
Strand 3	A	2410	2418	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2368	2370	first strand
Strand 2	A	2373	2377	anti-parallel
Strand 3	A	2387	2392	anti-parallel
Strand 4	A	2481	2486	anti-parallel
Strand 5	A	2431	2435	anti-parallel
Strand 6	A	2448	2450	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2329	2336	first strand
Strand 2	B	2508	2515	anti-parallel
Strand 3	B	2410	2418	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2369	2370	first strand
Strand 2	B	2373	2377	anti-parallel
Strand 3	B	2386	2392	anti-parallel
Strand 4	B	2481	2487	anti-parallel
Strand 5	B	2431	2435	anti-parallel
Strand 6	B	2447	2450	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2422	2423	first strand
Strand 2	F	498	499	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2329	2336	first strand
Strand 2	C	2508	2516	anti-parallel
Strand 3	C	2409	2418	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2369	2370	first strand
Strand 2	C	2373	2377	anti-parallel
Strand 3	C	2387	2392	anti-parallel
Strand 4	C	2481	2486	anti-parallel
Strand 5	C	2431	2435	anti-parallel
Strand 6	C	2448	2450	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2330	2336	first strand
Strand 2	D	2508	2516	anti-parallel
Strand 3	D	2409	2418	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2375	2377	first strand
Strand 2	D	2387	2392	anti-parallel
Strand 3	D	2481	2486	anti-parallel
Strand 4	D	2431	2435	anti-parallel
Strand 5	D	2449	2450	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2329	2336	first strand
Strand 2	E	2508	2516	anti-parallel
Strand 3	E	2409	2418	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2369	2370	first strand
Strand 2	E	2373	2377	anti-parallel
Strand 3	E	2386	2392	anti-parallel
Strand 4	E	2481	2487	anti-parallel
Strand 5	E	2431	2433	anti-parallel
Strand 6	E	2448	2450	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	27	28	first strand
Strand 2	F	38	42	anti-parallel
Strand 3	F	56	60	anti-parallel
Strand 4	F	72	73	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	65	66	first strand
Strand 2	F	69	70	anti-parallel

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There are 23 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	104	106	first strand
Strand 2	F	125	138	anti-parallel
Strand 3	F	146	150	anti-parallel
Strand 4	F	160	164	anti-parallel
Strand 5	F	170	173	anti-parallel
Strand 6	F	190	199	anti-parallel
Strand 7	F	205	212	anti-parallel
Strand 8	F	233	242	anti-parallel
Strand 9	F	262	269	anti-parallel
Strand 10	F	313	318	anti-parallel
Strand 11	F	334	345	anti-parallel
Strand 12	F	350	361	anti-parallel
Strand 13	F	372	376	anti-parallel
Strand 14	F	705	709	anti-parallel
Strand 15	F	714	722	anti-parallel
Strand 16	F	750	759	anti-parallel
Strand 17	F	765	778	anti-parallel
Strand 18	F	783	797	anti-parallel
Strand 19	F	810	817	anti-parallel
Strand 20	F	875	883	anti-parallel
Strand 21	F	895	907	anti-parallel
Strand 22	F	845	850	parallel
Strand 23	F	853	856	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	116	122	first strand
Strand 2	F	125	138	anti-parallel
Strand 3	F	146	150	anti-parallel
Strand 4	F	160	164	anti-parallel
Strand 5	F	170	173	anti-parallel
Strand 6	F	78	81	first strand
Strand 7	F	96	97	anti-parallel

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There are 9 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	180	182	first strand
Strand 2	F	190	199	anti-parallel
Strand 3	F	205	212	anti-parallel
Strand 4	F	233	242	anti-parallel
Strand 5	F	262	269	anti-parallel
Strand 6	F	313	318	anti-parallel
Strand 7	F	334	345	anti-parallel
Strand 8	F	350	361	anti-parallel
Strand 9	F	365	368	anti-parallel

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There are 12 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	853	856	first strand
Strand 2	F	845	850	anti-parallel
Strand 3	F	895	907	parallel
Strand 4	F	915	927	anti-parallel
Strand 5	F	938	945	anti-parallel
Strand 6	F	951	958	anti-parallel
Strand 7	F	989	1004	anti-parallel
Strand 8	F	1007	1024	anti-parallel
Strand 9	F	1052	1062	anti-parallel
Strand 10	F	1078	1088	anti-parallel
Strand 11	F	1128	1133	anti-parallel
Strand 12	F	1113	1116	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	386	390	first strand
Strand 2	F	691	696	anti-parallel
Strand 3	F	680	685	anti-parallel
Strand 4	F	667	671	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	402	405	first strand
Strand 2	F	414	418	anti-parallel
Strand 3	F	423	426	anti-parallel
Strand 4	F	445	446	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	428	430	first strand
Strand 2	F	439	441	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	457	460	first strand
Strand 2	F	469	473	anti-parallel
Strand 3	F	478	482	anti-parallel
Strand 4	F	493	494	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	508	510	first strand
Strand 2	F	519	523	anti-parallel
Strand 3	F	527	531	anti-parallel
Strand 4	F	544	545	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	562	566	first strand
Strand 2	F	575	579	anti-parallel
Strand 3	F	584	587	anti-parallel
Strand 4	F	599	601	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	589	591	first strand
Strand 2	F	594	595	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	616	619	first strand
Strand 2	F	628	632	anti-parallel
Strand 3	F	637	640	anti-parallel
Strand 4	F	652	653	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1135	1138	first strand
Strand 2	F	1147	1151	anti-parallel
Strand 3	F	1159	1160	anti-parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1173	1174	first strand
Strand 2	F	1180	1185	anti-parallel
Strand 3	F	1192	1196	anti-parallel
Strand 4	F	1202	1207	anti-parallel
Strand 5	F	1213	1221	anti-parallel
Strand 6	F	1226	1228	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1257	1262	first strand
Strand 2	F	1329	1335	anti-parallel
Strand 3	F	1346	1353	anti-parallel
Strand 4	F	1359	1366	anti-parallel
Strand 5	F	1390	1394	anti-parallel
Strand 6	F	1412	1414	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1369	1374	first strand
Strand 2	F	1380	1387	anti-parallel

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There are 36 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1397	1399	first strand
Strand 2	F	1405	1409	anti-parallel
Strand 3	F	1431	1436	anti-parallel
Strand 4	F	1442	1446	anti-parallel
Strand 5	F	1452	1457	anti-parallel
Strand 6	F	1461	1465	anti-parallel
Strand 7	G	14	18	anti-parallel
Strand 8	G	24	31	anti-parallel
Strand 9	G	40	48	anti-parallel
Strand 10	G	54	58	anti-parallel
Strand 11	G	71	75	anti-parallel
Strand 12	G	81	86	anti-parallel
Strand 13	G	90	96	anti-parallel
Strand 14	G	102	106	anti-parallel
Strand 15	G	112	117	anti-parallel
Strand 16	G	126	132	anti-parallel
Strand 17	G	138	145	anti-parallel
Strand 18	G	161	166	anti-parallel
Strand 19	G	169	176	anti-parallel
Strand 20	G	182	189	anti-parallel
Strand 21	G	215	221	anti-parallel
Strand 22	G	227	231	anti-parallel
Strand 23	G	237	242	anti-parallel
Strand 24	G	248	254	anti-parallel
Strand 25	G	261	269	anti-parallel
Strand 26	G	275	280	anti-parallel
Strand 27	G	285	290	anti-parallel
Strand 28	G	297	304	anti-parallel
Strand 29	G	309	318	anti-parallel
Strand 30	G	324	329	anti-parallel
Strand 31	G	346	350	anti-parallel
Strand 32	G	356	364	anti-parallel
Strand 33	G	386	395	anti-parallel
Strand 34	G	401	408	anti-parallel
Strand 35	G	413	421	anti-parallel
Strand 36	G	428	430	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	458	461	first strand
Strand 2	G	467	471	anti-parallel

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There are 10 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	477	481	first strand
Strand 2	G	487	494	anti-parallel
Strand 3	G	501	508	anti-parallel
Strand 4	G	511	517	anti-parallel
Strand 5	G	522	531	anti-parallel
Strand 6	G	539	546	anti-parallel
Strand 7	G	556	562	anti-parallel
Strand 8	G	568	572	anti-parallel
Strand 9	G	578	584	anti-parallel
Strand 10	G	590	595	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	606	608	first strand
Strand 2	G	611	613	anti-parallel
Strand 3	G	619	621	anti-parallel
Strand 4	G	624	626	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	659	660	first strand
Strand 2	H	666	667	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6L7I

Analysis of interatomic Contacts of Structural Units in PDB entry:
6L7I