Analysis of interatomic Contacts of Structural Units in PDB entry:
6L7P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6L7P entry

There are 18 chains in PDB entry 6L7P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 5	GLY 372
B	ASP 2	PRO 493
C	THR 12	SER 132
D	SER 2	THR 505
E	MET 1	TRP 101
F	MET 1	GLN 655
G	ASP 2	ARG 192
H	PRO 2	ARG 394
I	PHE 3	ALA 191
J	GLY 13	TYR 168
K	PRO 7	PRO 211
L	VAL 3	ASN 75
M	MET 1	HIS 110
N	GLY 2	ALA 149
O	ILE 3	ALA 69
P	VAL 4	HIS 44
Q	ALA 2	ALA 45
S	ILE 45	VAL 99

There are156 helices in PDB entry 6L7P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	19	Right-handed alpha
Helix 2	AA2	A	23	28	Right-handed alpha
Helix 3	AA3	A	30	60	Right-handed alpha
Helix 4	AA4	A	74	83	Right-handed alpha
Helix 5	AA5	A	95	113	Right-handed alpha
Helix 6	AA6	A	114	116	Right-handed 310
Helix 7	AA7	A	130	140	Right-handed alpha
Helix 8	AA8	A	141	152	Right-handed alpha
Helix 9	AA9	A	156	172	Right-handed alpha
Helix 10	AB1	A	173	188	Right-handed alpha
Helix 11	AB2	A	191	201	Right-handed alpha
Helix 12	AB3	A	203	206	Right-handed 310
Helix 13	AB4	A	207	212	Right-handed alpha
Helix 14	AB5	A	212	227	Right-handed alpha
Helix 15	AB6	A	250	276	Right-handed alpha
Helix 16	AB7	A	285	294	Right-handed alpha
Helix 17	AB8	A	299	330	Right-handed alpha
Helix 18	AB9	A	336	366	Right-handed alpha
Helix 19	AC1	B	3	11	Right-handed alpha
Helix 20	AC2	B	15	35	Right-handed alpha
Helix 21	AC3	B	42	57	Right-handed alpha
Helix 22	AC4	B	58	63	Right-handed alpha
Helix 23	AC5	B	77	106	Right-handed alpha
Helix 24	AC6	B	108	127	Right-handed alpha
Helix 25	AC7	B	131	149	Right-handed alpha
Helix 26	AC8	B	156	188	Right-handed alpha
Helix 27	AC9	B	193	198	Right-handed alpha
Helix 28	AD1	B	199	201	Right-handed 310
Helix 29	AD2	B	205	224	Right-handed alpha
Helix 30	AD3	B	225	229	Right-handed 310
Helix 31	AD4	B	231	239	Right-handed alpha
Helix 32	AD5	B	240	248	Right-handed alpha
Helix 33	AD6	B	249	267	Right-handed alpha
Helix 34	AD7	B	270	293	Right-handed alpha
Helix 35	AD8	B	298	320	Right-handed alpha
Helix 36	AD9	B	324	354	Right-handed alpha
Helix 37	AE1	B	359	363	Right-handed 310
Helix 38	AE2	B	369	385	Right-handed alpha
Helix 39	AE3	B	389	406	Right-handed alpha
Helix 40	AE4	B	407	426	Right-handed alpha
Helix 41	AE5	B	426	434	Right-handed alpha
Helix 42	AE6	B	456	477	Right-handed alpha
Helix 43	AE7	B	478	487	Right-handed alpha
Helix 44	AE8	C	19	43	Right-handed alpha
Helix 45	AE9	C	72	97	Right-handed alpha
Helix 46	AF1	C	103	126	Right-handed alpha
Helix 47	AF2	D	6	18	Right-handed alpha
Helix 48	AF3	D	19	21	Right-handed 310
Helix 49	AF4	D	31	57	Right-handed alpha
Helix 50	AF5	D	88	105	Right-handed alpha
Helix 51	AF6	D	112	133	Right-handed alpha
Helix 52	AF7	D	136	146	Right-handed alpha
Helix 53	AF8	D	147	157	Right-handed alpha
Helix 54	AF9	D	161	178	Right-handed alpha
Helix 55	AG1	D	179	189	Right-handed alpha
Helix 56	AG2	D	197	202	Right-handed alpha
Helix 57	AG3	D	207	226	Right-handed alpha
Helix 58	AG4	D	233	240	Right-handed alpha
Helix 59	AG5	D	243	252	Right-handed alpha
Helix 60	AG6	D	252	265	Right-handed alpha
Helix 61	AG7	D	277	299	Right-handed alpha
Helix 62	AG8	D	303	322	Right-handed alpha
Helix 63	AG9	D	325	355	Right-handed alpha
Helix 64	AH1	D	373	388	Right-handed alpha
Helix 65	AH2	D	392	407	Right-handed alpha
Helix 66	AH3	D	413	430	Right-handed alpha
Helix 67	AH4	D	431	442	Right-handed alpha
Helix 68	AH5	D	447	454	Right-handed alpha
Helix 69	AH6	D	460	480	Right-handed alpha
Helix 70	AH7	D	481	503	Right-handed alpha
Helix 71	AH8	E	2	23	Right-handed alpha
Helix 72	AH9	E	27	52	Right-handed alpha
Helix 73	AI1	E	58	88	Right-handed alpha
Helix 74	AI2	E	92	96	Right-handed 310
Helix 75	AI3	F	2	7	Right-handed alpha
Helix 76	AI4	F	13	27	Right-handed alpha
Helix 77	AI5	F	37	65	Right-handed alpha
Helix 78	AI6	F	90	115	Right-handed alpha
Helix 79	AI7	F	121	140	Right-handed alpha
Helix 80	AI8	F	143	163	Right-handed alpha
Helix 81	AI9	F	169	200	Right-handed alpha
Helix 82	AJ1	F	204	218	Right-handed alpha
Helix 83	AJ2	F	222	241	Right-handed alpha
Helix 84	AJ3	F	248	255	Right-handed alpha
Helix 85	AJ4	F	257	265	Right-handed alpha
Helix 86	AJ5	F	269	280	Right-handed alpha
Helix 87	AJ6	F	280	285	Right-handed alpha
Helix 88	AJ7	F	288	309	Right-handed alpha
Helix 89	AJ8	F	314	337	Right-handed alpha
Helix 90	AJ9	F	338	371	Right-handed alpha
Helix 91	AK1	F	391	405	Right-handed alpha
Helix 92	AK2	F	411	428	Right-handed alpha
Helix 93	AK3	F	428	454	Right-handed alpha
Helix 94	AK4	F	486	493	Right-handed alpha
Helix 95	AK5	F	494	504	Right-handed alpha
Helix 96	AK6	F	509	515	Right-handed alpha
Helix 97	AK7	F	530	554	Right-handed alpha
Helix 98	AK8	F	561	569	Right-handed alpha
Helix 99	AK9	F	570	578	Right-handed alpha
Helix 100	AL1	F	582	587	Right-handed alpha
Helix 101	AL2	F	587	629	Right-handed alpha
Helix 102	AL3	F	634	655	Right-handed alpha
Helix 103	AL4	G	3	29	Right-handed alpha
Helix 104	AL5	G	31	54	Right-handed alpha
Helix 105	AL6	G	56	69	Right-handed alpha
Helix 106	AL7	G	69	81	Right-handed alpha
Helix 107	AL8	G	93	118	Right-handed alpha
Helix 108	AL9	G	132	139	Right-handed alpha
Helix 109	AM1	G	144	165	Right-handed alpha
Helix 110	AM2	H	63	69	Right-handed alpha
Helix 111	AM3	H	75	83	Right-handed alpha
Helix 112	AM4	H	84	90	Right-handed alpha
Helix 113	AM5	H	95	116	Right-handed alpha
Helix 114	AM6	H	117	124	Right-handed alpha
Helix 115	AM7	H	130	149	Right-handed alpha
Helix 116	AM8	H	171	193	Right-handed alpha
Helix 117	AM9	H	199	204	Right-handed alpha
Helix 118	AN1	H	211	219	Right-handed alpha
Helix 119	AN2	H	222	229	Right-handed alpha
Helix 120	AN3	H	233	238	Right-handed alpha
Helix 121	AN4	H	257	282	Right-handed alpha
Helix 122	AN5	H	287	298	Right-handed alpha
Helix 123	AN6	H	357	363	Right-handed alpha
Helix 124	AN7	H	365	370	Right-handed alpha
Helix 125	AN8	H	377	385	Right-handed alpha
Helix 126	AN9	H	388	393	Right-handed alpha
Helix 127	AO1	I	4	32	Right-handed alpha
Helix 128	AO2	I	68	73	Right-handed alpha
Helix 129	AO3	I	137	142	Right-handed alpha
Helix 130	AO4	I	186	191	Right-handed alpha
Helix 131	AO5	J	14	21	Right-handed alpha
Helix 132	AO6	J	45	55	Right-handed alpha
Helix 133	AO7	J	115	118	Right-handed 310
Helix 134	AO8	J	119	128	Right-handed alpha
Helix 135	AO9	K	25	43	Right-handed alpha
Helix 136	AP1	K	51	62	Right-handed alpha
Helix 137	AP2	K	66	71	Right-handed 310
Helix 138	AP3	K	94	104	Right-handed alpha
Helix 139	AP4	K	115	120	Right-handed alpha
Helix 140	AP5	K	151	167	Right-handed alpha
Helix 141	AP6	L	4	22	Right-handed alpha
Helix 142	AP7	L	22	35	Right-handed alpha
Helix 143	AP8	L	40	54	Right-handed alpha
Helix 144	AP9	L	54	62	Right-handed alpha
Helix 145	AQ1	M	43	60	Right-handed alpha
Helix 146	AQ2	M	66	87	Right-handed alpha
Helix 147	AQ3	N	8	16	Right-handed alpha
Helix 148	AQ4	N	29	41	Right-handed alpha
Helix 149	AQ5	N	54	60	Right-handed alpha
Helix 150	AQ6	N	82	90	Right-handed alpha
Helix 151	AQ7	N	110	123	Right-handed alpha
Helix 152	AQ8	N	143	149	Right-handed alpha
Helix 153	AQ9	O	30	35	Right-handed alpha
Helix 154	AR1	P	7	13	Right-handed alpha
Helix 155	AR2	P	14	27	Right-handed alpha
Helix 156	AR3	Q	17	43	Right-handed alpha

There are 18 sheets in PDB entry 6L7P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	69	first strand
Strand 2	B	74	75	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	67	71	first strand
Strand 2	D	79	83	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	69	74	first strand
Strand 2	F	84	89	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	15	first strand
Strand 2	H	27	32	anti-parallel
Strand 3	H	39	43	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	325	332	first strand
Strand 2	H	337	344	anti-parallel
Strand 3	H	352	356	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	55	58	first strand
Strand 2	I	118	121	anti-parallel
Strand 3	S	84	91	parallel
Strand 4	S	74	81	anti-parallel
Strand 5	S	64	71	anti-parallel
Strand 6	S	50	53	anti-parallel
Strand 7	S	95	97	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	81	84	first strand
Strand 2	I	91	95	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	27	28	first strand
Strand 2	J	38	40	anti-parallel
Strand 3	J	93	100	parallel
Strand 4	J	75	82	anti-parallel
Strand 5	J	60	68	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	106	108	first strand
Strand 2	J	131	133	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	9	10	first strand
Strand 2	M	107	108	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	13	14	first strand
Strand 2	M	92	93	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	45	47	first strand
Strand 2	K	83	87	parallel
Strand 3	K	110	114	parallel
Strand 4	K	143	145	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	183	187	first strand
Strand 2	M	28	33	anti-parallel
Strand 3	M	10	13	anti-parallel
Strand 4	M	4	6	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	189	191	first strand
Strand 2	M	61	64	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	46	47	first strand
Strand 2	N	98	102	parallel
Strand 3	N	126	132	parallel
Strand 4	N	18	22	parallel
Strand 5	N	139	142	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	63	65	first strand
Strand 2	N	78	80	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	9	11	first strand
Strand 2	O	66	68	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	39	43	first strand
Strand 2	O	47	51	anti-parallel
Strand 3	O	59	62	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6L7P

Analysis of interatomic Contacts of Structural Units in PDB entry:
6L7P