Analysis of interatomic Contacts of Structural Units in PDB entry:
6L86

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6L86 entry

There are 4 chains in PDB entry 6L86 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	PRO 294
B	MET 1	MET 293
C	MET 1	ALA 295
D	MET 1	ALA 295

There are 32 helices in PDB entry 6L86. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	24	39	Right-handed alpha
Helix 2	AA2	A	49	59	Right-handed alpha
Helix 3	AA3	A	68	72	Right-handed 310
Helix 4	AA4	A	134	140	Right-handed alpha
Helix 5	AA5	A	142	149	Right-handed alpha
Helix 6	AA6	A	165	169	Right-handed 310
Helix 7	AA7	A	172	184	Right-handed alpha
Helix 8	AA8	A	224	233	Right-handed alpha
Helix 9	AA9	B	24	39	Right-handed alpha
Helix 10	AB1	B	49	59	Right-handed alpha
Helix 11	AB2	B	68	72	Right-handed 310
Helix 12	AB3	B	134	140	Right-handed alpha
Helix 13	AB4	B	142	149	Right-handed alpha
Helix 14	AB5	B	165	169	Right-handed 310
Helix 15	AB6	B	172	184	Right-handed alpha
Helix 16	AB7	B	224	233	Right-handed alpha
Helix 17	AB8	C	24	39	Right-handed alpha
Helix 18	AB9	C	49	59	Right-handed alpha
Helix 19	AC1	C	68	72	Right-handed 310
Helix 20	AC2	C	134	140	Right-handed alpha
Helix 21	AC3	C	142	150	Right-handed alpha
Helix 22	AC4	C	165	169	Right-handed 310
Helix 23	AC5	C	172	184	Right-handed alpha
Helix 24	AC6	C	224	233	Right-handed alpha
Helix 25	AC7	D	24	39	Right-handed alpha
Helix 26	AC8	D	49	58	Right-handed alpha
Helix 27	AC9	D	68	72	Right-handed 310
Helix 28	AD1	D	134	140	Right-handed alpha
Helix 29	AD2	D	142	150	Right-handed alpha
Helix 30	AD3	D	165	169	Right-handed 310
Helix 31	AD4	D	172	184	Right-handed alpha
Helix 32	AD5	D	224	233	Right-handed alpha

There are 20 sheets in PDB entry 6L86. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	5	first strand
Strand 2	A	13	16	anti-parallel
Strand 3	A	40	43	parallel
Strand 4	A	255	259	anti-parallel
Strand 5	A	114	121	anti-parallel
Strand 6	A	277	284	anti-parallel
Strand 7	A	62	63	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	5	first strand
Strand 2	A	13	16	anti-parallel
Strand 3	A	40	43	parallel
Strand 4	A	255	259	anti-parallel
Strand 5	A	114	121	anti-parallel
Strand 6	A	277	284	anti-parallel
Strand 7	A	80	83	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	245	248	first strand
Strand 2	A	128	133	anti-parallel
Strand 3	A	263	268	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	187	190	first strand
Strand 2	A	153	156	anti-parallel
Strand 3	A	210	214	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	194	first strand
Strand 2	A	201	203	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	4	first strand
Strand 2	B	13	16	anti-parallel
Strand 3	B	40	43	parallel
Strand 4	B	255	259	anti-parallel
Strand 5	B	114	121	anti-parallel
Strand 6	B	277	284	anti-parallel
Strand 7	B	62	63	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	4	first strand
Strand 2	B	13	16	anti-parallel
Strand 3	B	40	43	parallel
Strand 4	B	255	259	anti-parallel
Strand 5	B	114	121	anti-parallel
Strand 6	B	277	284	anti-parallel
Strand 7	B	80	83	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	245	248	first strand
Strand 2	B	128	133	anti-parallel
Strand 3	B	263	268	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	190	first strand
Strand 2	B	153	156	anti-parallel
Strand 3	B	210	214	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	194	first strand
Strand 2	B	201	203	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	5	first strand
Strand 2	C	13	16	anti-parallel
Strand 3	C	40	43	parallel
Strand 4	C	255	259	anti-parallel
Strand 5	C	114	121	anti-parallel
Strand 6	C	277	284	anti-parallel
Strand 7	C	62	64	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	5	first strand
Strand 2	C	13	16	anti-parallel
Strand 3	C	40	43	parallel
Strand 4	C	255	259	anti-parallel
Strand 5	C	114	121	anti-parallel
Strand 6	C	277	284	anti-parallel
Strand 7	C	80	83	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	245	248	first strand
Strand 2	C	129	133	anti-parallel
Strand 3	C	263	266	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	187	190	first strand
Strand 2	C	153	156	anti-parallel
Strand 3	C	210	214	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	192	194	first strand
Strand 2	C	201	203	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	5	first strand
Strand 2	D	13	16	anti-parallel
Strand 3	D	40	43	parallel
Strand 4	D	255	259	anti-parallel
Strand 5	D	114	121	anti-parallel
Strand 6	D	277	284	anti-parallel
Strand 7	D	62	63	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	5	first strand
Strand 2	D	13	16	anti-parallel
Strand 3	D	40	43	parallel
Strand 4	D	255	259	anti-parallel
Strand 5	D	114	121	anti-parallel
Strand 6	D	277	284	anti-parallel
Strand 7	D	80	83	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	245	248	first strand
Strand 2	D	129	133	anti-parallel
Strand 3	D	263	267	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	187	190	first strand
Strand 2	D	153	156	anti-parallel
Strand 3	D	210	214	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	192	194	first strand
Strand 2	D	201	203	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6L86

Analysis of interatomic Contacts of Structural Units in PDB entry:
6L86