Analysis of interatomic Contacts of Structural Units in PDB entry:
6L8N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L8N entry

There is 1 chain in PDB entry 6L8N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 174GLN 1114
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6L8N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
242 250Right-handed alpha
Helix 2
AA2
A
251 256Right-handed 310
Helix 3
AA3
A
312 330Right-handed alpha
Helix 4
AA4
A
362 374Right-handed alpha
Helix 5
AA5
A
397 411Right-handed alpha
Helix 6
AA6
A
413 417Right-handed 310
Helix 7
AA7
A
489 501Right-handed alpha
Helix 8
AA8
A
504 514Right-handed alpha
Helix 9
AA9
A
551 553Right-handed 310
Helix 10
AB1
A
554 564Right-handed alpha
Helix 11
AB2
A
583 589Right-handed alpha
Helix 12
AB3
A
600 610Right-handed alpha
Helix 13
AB4
A
629 633Right-handed 310
Helix 14
AB5
A
637 645Right-handed alpha
Helix 15
AB6
A
664 674Right-handed alpha
Helix 16
AB7
A
680 688Right-handed alpha
Helix 17
AB8
A
688 694Right-handed alpha
Helix 18
AB9
A
696 709Right-handed alpha
Helix 19
AC1
A
743 767Right-handed alpha
Helix 20
AC2
A
768 772Right-handed 310
Helix 21
AC3
A
773 790Right-handed alpha
Helix 22
AC4
A
791 794Right-handed 310
Helix 23
AC5
A
832 847Right-handed alpha
Helix 24
AC6
A
868 870Right-handed 310
Helix 25
AC7
A
883 895Right-handed alpha
Helix 26
AC8
A
910 913Right-handed 310
Helix 27
AC9
A
938 955Right-handed alpha
Helix 28
AD1
A
966 981Right-handed alpha
Helix 29
AD2
A
996 1009Right-handed alpha
Helix 30
AD3
A
1045 1055Right-handed alpha
Helix 31
AD4
A
1075 1091Right-handed alpha
Helix 32
AD5
A
1098 1112Right-handed alpha
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There are 6 sheets in PDB entry 6L8N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 206first strand
Strand 2
A
227 231anti-parallel
Strand 3
A
237 240anti-parallel
Strand 4
A
178 188anti-parallel
Strand 5
A
278 287anti-parallel
Strand 6
A
259 265anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
436 439first strand
Strand 2
A
456 460anti-parallel
Strand 3
A
465 467anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
573 575first strand
Strand 2
A
596 599parallel
Strand 3
A
541 549parallel
Strand 4
A
620 627parallel
Strand 5
A
648 655parallel
Strand 6
A
479 484parallel
Strand 7
A
712 715parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
733 740first strand
Strand 2
A
1065 1072parallel
Strand 3
A
1034 1039parallel
Strand 4
A
959 964parallel
Strand 5
A
1015 1021parallel
Strand 6
A
986 990parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
872 874first strand
Strand 2
A
880 882anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
915 917first strand
Strand 2
A
929 931anti-parallel
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