Analysis of interatomic Contacts of Structural Units in PDB entry:
6L94


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6L94 entry

There is 1 chain in PDB entry 6L94 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 21GLU 356
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6L94. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 32Right-handed alpha
Helix 2
AA2
A
39 43Right-handed 310
Helix 3
AA3
A
73 81Right-handed alpha
Helix 4
AA4
A
84 88Right-handed 310
Helix 5
AA5
A
109 120Right-handed alpha
Helix 6
AA6
A
131 133Right-handed 310
Helix 7
AA7
A
136 142Right-handed alpha
Helix 8
AA8
A
142 154Right-handed alpha
Helix 9
AA9
A
163 168Right-handed alpha
Helix 10
AB1
A
193 207Right-handed alpha
Helix 11
AB2
A
323 337Right-handed alpha
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There are 3 sheets in PDB entry 6L94. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 64first strand
Strand 2
A
91 93anti-parallel
Strand 3
A
96 102anti-parallel
Strand 4
A
275 278anti-parallel
Strand 5
A
243 247anti-parallel
Strand 6
A
339 344anti-parallel
Strand 7
A
216 221anti-parallel
Strand 8
A
170 174anti-parallel
Strand 9
A
128 129anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 231first strand
Strand 2
A
286 289anti-parallel
Strand 3
A
256 257anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 270first strand
Strand 2
A
252 253anti-parallel
Strand 3
A
291 292anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il