Analysis of interatomic Contacts of Structural Units in PDB entry:
6LA5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LA5 entry

There are 5 chains in PDB entry 6LA5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3PRO 287
B
 ASP 11LEU 261
C
 GLY 1GLN 238
D
 MET 1ASN 69
E
 LYS 5GLY 129
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6LA5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 37Right-handed 310
Helix 2
AA2
A
43 48Right-handed alpha
Helix 3
AA3
A
63 69Right-handed alpha
Helix 4
AA4
A
100 108Right-handed alpha
Helix 5
AA5
A
160 164Right-handed 310
Helix 6
AA6
A
209 214Right-handed alpha
Helix 7
AA7
B
91 98Right-handed alpha
Helix 8
AA8
B
169 173Right-handed 310
Helix 9
AA9
B
180 185Right-handed 310
Helix 10
AB1
C
64 69Right-handed 310
Helix 11
AB2
C
98 105Right-handed alpha
Helix 12
AB3
C
144 149Right-handed alpha
Helix 13
AB4
D
35 39Right-handed 310
Helix 14
AB5
D
49 53Right-handed 310
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There are 15 sheets in PDB entry 6LA5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 6first strand
Strand 2
D
3 7parallel
Strand 3
D
26 29anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
C
163 168anti-parallel
Strand 3
C
114 120anti-parallel
Strand 4
C
207 216anti-parallel
Strand 5
C
70 73anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 80first strand
Strand 2
A
232 250anti-parallel
Strand 3
A
110 127anti-parallel
Strand 4
A
192 193anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 183first strand
Strand 2
A
110 127anti-parallel
Strand 3
A
232 250anti-parallel
Strand 4
C
39 40anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 94first strand
Strand 2
A
218 223anti-parallel
Strand 3
A
141 147anti-parallel
Strand 4
A
169 173anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 18first strand
Strand 2
B
21 25anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 33first strand
Strand 2
B
197 202parallel
Strand 3
B
99 111anti-parallel
Strand 4
B
240 255anti-parallel
Strand 5
B
64 70anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 154first strand
Strand 2
B
78 82anti-parallel
Strand 3
B
219 227anti-parallel
Strand 4
B
121 128anti-parallel
Strand 5
B
187 191anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
83 86first strand
Strand 2
C
189 194anti-parallel
Strand 3
C
129 135anti-parallel
Strand 4
C
152 157anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
177 178first strand
Strand 2
C
107 111anti-parallel
Strand 3
C
221 225anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
16 19first strand
Strand 2
E
29 34anti-parallel
Strand 3
E
45 51anti-parallel
Strand 4
E
54 57anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
38 41first strand
Strand 2
E
63 66anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
78 80first strand
Strand 2
E
92 97anti-parallel
Strand 3
E
108 110anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
102 104first strand
Strand 2
E
126 128anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
112 114first strand
Strand 2
E
117 119anti-parallel
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