Analysis of interatomic Contacts of Structural Units in PDB entry:
6LAA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LAA entry

There is 1 chain in PDB entry 6LAA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 27LEU 779
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6LAA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 35Right-handed alpha
Helix 2
AA2
A
39 45Right-handed alpha
Helix 3
AA3
A
45 50Right-handed alpha
Helix 4
AA4
A
50 57Right-handed alpha
Helix 5
AA5
A
72 82Right-handed alpha
Helix 6
AA6
A
99 109Right-handed alpha
Helix 7
AA7
A
123 133Right-handed alpha
Helix 8
AA8
A
134 136Right-handed 310
Helix 9
AA9
A
137 143Right-handed alpha
Helix 10
AB1
A
144 160Right-handed alpha
Helix 11
AB2
A
167 171Right-handed alpha
Helix 12
AB3
A
173 185Right-handed alpha
Helix 13
AB4
A
190 207Right-handed alpha
Helix 14
AB5
A
210 237Right-handed alpha
Helix 15
AB6
A
243 255Right-handed alpha
Helix 16
AB7
A
260 275Right-handed alpha
Helix 17
AB8
A
276 292Right-handed alpha
Helix 18
AB9
A
293 303Right-handed alpha
Helix 19
AC1
A
306 319Right-handed alpha
Helix 20
AC2
A
349 353Right-handed alpha
Helix 21
AC3
A
371 375Right-handed 310
Helix 22
AC4
A
387 406Right-handed alpha
Helix 23
AC5
A
435 438Right-handed 310
Helix 24
AC6
A
439 444Right-handed alpha
Helix 25
AC7
A
445 450Right-handed 310
Helix 26
AC8
A
460 464Right-handed 310
Helix 27
AC9
A
539 548Right-handed alpha
Helix 28
AD1
A
580 595Right-handed alpha
Helix 29
AD2
A
606 610Right-handed 310
Helix 30
AD3
A
612 621Right-handed alpha
Helix 31
AD4
A
630 632Right-handed 310
Helix 32
AD5
A
636 643Right-handed alpha
Helix 33
AD6
A
655 667Right-handed alpha
Helix 34
AD7
A
687 691Right-handed 310
Helix 35
AD8
A
712 720Right-handed alpha
Helix 36
AD9
A
753 760Right-handed alpha
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There are 7 sheets in PDB entry 6LAA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
68 70anti-parallel
Strand 3
A
344 348parallel
Strand 4
A
323 328anti-parallel
Strand 5
A
86 87anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 166first strand
Strand 2
A
431 433anti-parallel
Strand 3
A
410 411anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 334first strand
Strand 2
A
337 339anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 516first strand
Strand 2
A
501 505anti-parallel
Strand 3
A
553 560anti-parallel
Strand 4
A
466 477anti-parallel
Strand 5
A
480 486anti-parallel
Strand 6
A
527 532anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
624 628first strand
Strand 2
A
597 604parallel
Strand 3
A
571 577parallel
Strand 4
A
648 654parallel
Strand 5
A
673 678parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
703 707first strand
Strand 2
A
694 698anti-parallel
Strand 3
A
774 777parallel
Strand 4
A
737 742anti-parallel
Strand 5
A
762 764anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
745 746first strand
Strand 2
A
769 770anti-parallel
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