Analysis of interatomic Contacts of Structural Units in PDB entry:
6LB5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LB5 entry

There are 4 chains in PDB entry 6LB5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 229ALA 457
B
 HIS 687ASP 696
C
 ASP 229ALA 457
D
 LYS 686ASP 696
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6LB5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
231 241Right-handed alpha
Helix 2
AA2
A
264 286Right-handed alpha
Helix 3
AA3
A
293 317Right-handed alpha
Helix 4
AA4
A
334 340Right-handed alpha
Helix 5
AA5
A
342 353Right-handed alpha
Helix 6
AA6
A
353 360Right-handed alpha
Helix 7
AA7
A
363 376Right-handed alpha
Helix 8
AA8
A
385 408Right-handed alpha
Helix 9
AA9
A
413 420Right-handed alpha
Helix 10
AB1
A
421 443Right-handed alpha
Helix 11
AB2
A
448 455Right-handed alpha
Helix 12
AB3
B
688 695Right-handed alpha
Helix 13
AB4
C
231 242Right-handed alpha
Helix 14
AB5
C
245 252Right-handed alpha
Helix 15
AB6
C
263 285Right-handed alpha
Helix 16
AB7
C
293 317Right-handed alpha
Helix 17
AB8
C
318 320Right-handed 310
Helix 18
AB9
C
333 341Right-handed alpha
Helix 19
AC1
C
342 353Right-handed alpha
Helix 20
AC2
C
353 360Right-handed alpha
Helix 21
AC3
C
363 376Right-handed alpha
Helix 22
AC4
C
385 408Right-handed alpha
Helix 23
AC5
C
413 420Right-handed alpha
Helix 24
AC6
C
421 443Right-handed alpha
Helix 25
AC7
C
448 456Right-handed alpha
Helix 26
AC8
D
687 696Right-handed alpha
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There are 2 sheets in PDB entry 6LB5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 325first strand
Strand 2
A
331 333anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
324 325first strand
Strand 2
C
331 332anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il