Analysis of interatomic Contacts of Structural Units in PDB entry:
6LBA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LBA entry

There are 4 chains in PDB entry 6LBA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA -1LYS 570
C
 ALA -1LYS 570
B
 ALA -1LYS 570
D
 ALA -1LYS 570
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are100 helices in PDB entry 6LBA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-1 19Right-handed alpha
Helix 2
AA2
A
30 53Right-handed alpha
Helix 3
AA3
A
62 64Right-handed 310
Helix 4
AA4
A
65 88Right-handed alpha
Helix 5
AA5
A
91 99Right-handed alpha
Helix 6
AA6
A
104 118Right-handed alpha
Helix 7
AA7
A
122 126Right-handed 310
Helix 8
AA8
A
134 149Right-handed alpha
Helix 9
AA9
A
155 163Right-handed alpha
Helix 10
AB1
A
170 171Right-handed 310
Helix 11
AB2
A
173 174Right-handed 310
Helix 12
AB3
A
175 198Right-handed alpha
Helix 13
AB4
A
206 218Right-handed alpha
Helix 14
AB5
A
275 284Right-handed 310
Helix 15
AB6
A
314 320Right-handed alpha
Helix 16
AB7
A
332 352Right-handed alpha
Helix 17
AB8
A
403 407Right-handed 310
Helix 18
AB9
A
409 413Right-handed 310
Helix 19
AC1
A
432 447Right-handed alpha
Helix 20
AC2
A
462 468Right-handed alpha
Helix 21
AC3
A
478 490Right-handed alpha
Helix 22
AC4
A
499 516Right-handed alpha
Helix 23
AC5
A
530 541Right-handed alpha
Helix 24
AC6
A
552 554Right-handed 310
Helix 25
AC7
A
555 570Right-handed alpha
Helix 26
AC8
C
0 19Right-handed alpha
Helix 27
AC9
C
30 53Right-handed alpha
Helix 28
AD1
C
62 64Right-handed 310
Helix 29
AD2
C
65 88Right-handed alpha
Helix 30
AD3
C
91 99Right-handed alpha
Helix 31
AD4
C
104 118Right-handed alpha
Helix 32
AD5
C
122 126Right-handed 310
Helix 33
AD6
C
134 149Right-handed alpha
Helix 34
AD7
C
155 163Right-handed alpha
Helix 35
AD8
C
170 171Right-handed 310
Helix 36
AD9
C
173 174Right-handed 310
Helix 37
AE1
C
175 198Right-handed alpha
Helix 38
AE2
C
206 218Right-handed alpha
Helix 39
AE3
C
275 284Right-handed 310
Helix 40
AE4
C
314 320Right-handed alpha
Helix 41
AE5
C
332 352Right-handed alpha
Helix 42
AE6
C
403 407Right-handed 310
Helix 43
AE7
C
409 413Right-handed 310
Helix 44
AE8
C
432 447Right-handed alpha
Helix 45
AE9
C
462 468Right-handed alpha
Helix 46
AF1
C
478 490Right-handed alpha
Helix 47
AF2
C
499 516Right-handed alpha
Helix 48
AF3
C
530 541Right-handed alpha
Helix 49
AF4
C
552 554Right-handed 310
Helix 50
AF5
C
555 570Right-handed alpha
Helix 51
AF6
B
0 19Right-handed alpha
Helix 52
AF7
B
30 53Right-handed alpha
Helix 53
AF8
B
62 64Right-handed 310
Helix 54
AF9
B
65 88Right-handed alpha
Helix 55
AG1
B
91 99Right-handed alpha
Helix 56
AG2
B
104 118Right-handed alpha
Helix 57
AG3
B
122 126Right-handed 310
Helix 58
AG4
B
134 149Right-handed alpha
Helix 59
AG5
B
155 163Right-handed alpha
Helix 60
AG6
B
170 171Right-handed 310
Helix 61
AG7
B
173 174Right-handed 310
Helix 62
AG8
B
175 198Right-handed alpha
Helix 63
AG9
B
206 218Right-handed alpha
Helix 64
AH1
B
275 284Right-handed 310
Helix 65
AH2
B
314 320Right-handed alpha
Helix 66
AH3
B
332 352Right-handed alpha
Helix 67
AH4
B
403 407Right-handed 310
Helix 68
AH5
B
409 413Right-handed 310
Helix 69
AH6
B
432 447Right-handed alpha
Helix 70
AH7
B
462 468Right-handed alpha
Helix 71
AH8
B
478 490Right-handed alpha
Helix 72
AH9
B
499 516Right-handed alpha
Helix 73
AI1
B
530 541Right-handed alpha
Helix 74
AI2
B
552 554Right-handed 310
Helix 75
AI3
B
555 570Right-handed alpha
Helix 76
AI4
D
0 19Right-handed alpha
Helix 77
AI5
D
30 53Right-handed alpha
Helix 78
AI6
D
62 64Right-handed 310
Helix 79
AI7
D
65 88Right-handed alpha
Helix 80
AI8
D
91 99Right-handed alpha
Helix 81
AI9
D
104 118Right-handed alpha
Helix 82
AJ1
D
122 126Right-handed 310
Helix 83
AJ2
D
134 149Right-handed alpha
Helix 84
AJ3
D
155 163Right-handed alpha
Helix 85
AJ4
D
170 171Right-handed 310
Helix 86
AJ5
D
173 174Right-handed 310
Helix 87
AJ6
D
175 198Right-handed alpha
Helix 88
AJ7
D
206 218Right-handed alpha
Helix 89
AJ8
D
275 284Right-handed 310
Helix 90
AJ9
D
314 320Right-handed alpha
Helix 91
AK1
D
332 352Right-handed alpha
Helix 92
AK2
D
403 407Right-handed 310
Helix 93
AK3
D
409 413Right-handed 310
Helix 94
AK4
D
432 447Right-handed alpha
Helix 95
AK5
D
462 468Right-handed alpha
Helix 96
AK6
D
478 490Right-handed alpha
Helix 97
AK7
D
499 516Right-handed alpha
Helix 98
AK8
D
530 541Right-handed alpha
Helix 99
AK9
D
552 554Right-handed 310
Helix 100
AL1
D
555 570Right-handed alpha
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There are 4 sheets in PDB entry 6LBA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
380 381anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
365 366first strand
Strand 2
C
380 381anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
365 366first strand
Strand 2
B
380 381anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
365 366first strand
Strand 2
D
380 381anti-parallel
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