Analysis of interatomic Contacts of Structural Units in PDB entry:
6LBH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6LBH entry

There are 6 chains in PDB entry 6LBH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 271	GLU 448
B	LEU 271	GLU 448
D	ASP 1	ARG 216
C	GLU 1	ARG 224
F	ASP 1	ARG 216
E	GLU 1	ARG 224

There are 31 helices in PDB entry 6LBH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	277	306	Right-handed alpha
Helix 2	AA2	A	306	311	Right-handed alpha
Helix 3	AA3	A	315	318	Right-handed 310
Helix 4	AA4	A	319	343	Right-handed alpha
Helix 5	AA5	A	348	350	Right-handed 310
Helix 6	AA6	A	351	382	Right-handed alpha
Helix 7	AA7	A	383	385	Right-handed 310
Helix 8	AA8	A	386	416	Right-handed alpha
Helix 9	AA9	A	418	423	Right-handed alpha
Helix 10	AB1	A	423	447	Right-handed alpha
Helix 11	AB2	B	277	306	Right-handed alpha
Helix 12	AB3	B	306	311	Right-handed alpha
Helix 13	AB4	B	315	318	Right-handed 310
Helix 14	AB5	B	319	344	Right-handed alpha
Helix 15	AB6	B	351	382	Right-handed alpha
Helix 16	AB7	B	383	385	Right-handed 310
Helix 17	AB8	B	386	401	Right-handed alpha
Helix 18	AB9	B	401	416	Right-handed alpha
Helix 19	AC1	B	423	433	Right-handed alpha
Helix 20	AC2	B	433	438	Right-handed alpha
Helix 21	AC3	B	438	447	Right-handed alpha
Helix 22	AC4	D	126	131	Right-handed alpha
Helix 23	AC5	D	187	194	Right-handed alpha
Helix 24	AC6	C	28	30	Right-handed 310
Helix 25	AC7	C	61	65	Right-handed 310
Helix 26	AC8	C	87	91	Right-handed 310
Helix 27	AC9	F	126	131	Right-handed alpha
Helix 28	AD1	F	187	194	Right-handed alpha
Helix 29	AD2	E	28	30	Right-handed 310
Helix 30	AD3	E	61	65	Right-handed 310
Helix 31	AD4	E	87	91	Right-handed 310

There are 22 sheets in PDB entry 6LBH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	7	first strand
Strand 2	D	20	24	anti-parallel
Strand 3	D	75	80	anti-parallel
Strand 4	D	67	72	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	12	13	first strand
Strand 2	D	110	111	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	50	53	first strand
Strand 2	D	40	43	anti-parallel
Strand 3	D	90	93	anti-parallel
Strand 4	D	107	108	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	119	123	first strand
Strand 2	D	136	144	anti-parallel
Strand 3	D	178	185	anti-parallel
Strand 4	D	164	168	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	159	first strand
Strand 2	D	151	155	anti-parallel
Strand 3	D	197	201	anti-parallel
Strand 4	D	210	212	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	6	first strand
Strand 2	C	19	23	anti-parallel
Strand 3	C	78	83	anti-parallel
Strand 4	C	68	73	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	11	first strand
Strand 2	C	119	121	parallel
Strand 3	C	92	101	anti-parallel
Strand 4	C	32	39	anti-parallel
Strand 5	C	45	51	anti-parallel
Strand 6	C	58	59	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	11	first strand
Strand 2	C	119	121	parallel
Strand 3	C	92	101	anti-parallel
Strand 4	C	113	114	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	133	first strand
Strand 2	C	146	156	anti-parallel
Strand 3	C	186	195	anti-parallel
Strand 4	C	174	176	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	133	first strand
Strand 2	C	146	156	anti-parallel
Strand 3	C	186	195	anti-parallel
Strand 4	C	180	181	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	162	165	first strand
Strand 2	C	205	209	anti-parallel
Strand 3	C	218	220	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	7	first strand
Strand 2	F	20	24	anti-parallel
Strand 3	F	75	80	anti-parallel
Strand 4	F	67	72	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	12	13	first strand
Strand 2	F	110	111	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	50	53	first strand
Strand 2	F	40	43	anti-parallel
Strand 3	F	90	93	anti-parallel
Strand 4	F	107	108	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	119	123	first strand
Strand 2	F	135	144	anti-parallel
Strand 3	F	178	186	anti-parallel
Strand 4	F	164	168	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	158	159	first strand
Strand 2	F	151	155	anti-parallel
Strand 3	F	197	201	anti-parallel
Strand 4	F	210	212	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	6	first strand
Strand 2	E	19	23	anti-parallel
Strand 3	E	78	82	anti-parallel
Strand 4	E	70	73	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	12	first strand
Strand 2	E	119	122	parallel
Strand 3	E	92	101	anti-parallel
Strand 4	E	32	39	anti-parallel
Strand 5	E	45	51	anti-parallel
Strand 6	E	58	59	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	12	first strand
Strand 2	E	119	122	parallel
Strand 3	E	92	101	anti-parallel
Strand 4	E	113	114	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	131	133	first strand
Strand 2	E	147	154	anti-parallel
Strand 3	E	185	194	anti-parallel
Strand 4	E	174	176	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	131	133	first strand
Strand 2	E	147	154	anti-parallel
Strand 3	E	185	194	anti-parallel
Strand 4	E	180	182	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	162	165	first strand
Strand 2	E	205	209	anti-parallel
Strand 3	E	218	220	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6LBH

Analysis of interatomic Contacts of Structural Units in PDB entry:
6LBH