Analysis of interatomic Contacts of Structural Units in PDB entry:
6LE4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6LE4 entry

There are 6 chains in PDB entry 6LE4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ALA 380
B	MET 1	ALA 380
C	MET 1	ALA 380
D	MET 1	ALA 380
E	MET 1	ALA 380
F	MET 1	ALA 380

There are 96 helices in PDB entry 6LE4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	10	Right-handed alpha
Helix 2	AA2	A	48	62	Right-handed alpha
Helix 3	AA3	A	72	82	Right-handed alpha
Helix 4	AA4	A	97	107	Right-handed alpha
Helix 5	AA5	A	108	112	Right-handed 310
Helix 6	AA6	A	122	130	Right-handed alpha
Helix 7	AA7	A	151	162	Right-handed alpha
Helix 8	AA8	A	179	184	Right-handed 310
Helix 9	AA9	A	211	226	Right-handed alpha
Helix 10	AB1	A	230	242	Right-handed alpha
Helix 11	AB2	A	243	264	Right-handed alpha
Helix 12	AB3	A	281	289	Right-handed alpha
Helix 13	AB4	A	305	311	Right-handed alpha
Helix 14	AB5	A	331	335	Right-handed 310
Helix 15	AB6	A	341	349	Right-handed alpha
Helix 16	AB7	A	363	377	Right-handed alpha
Helix 17	AB8	B	2	10	Right-handed alpha
Helix 18	AB9	B	48	62	Right-handed alpha
Helix 19	AC1	B	72	82	Right-handed alpha
Helix 20	AC2	B	97	107	Right-handed alpha
Helix 21	AC3	B	108	112	Right-handed 310
Helix 22	AC4	B	122	130	Right-handed alpha
Helix 23	AC5	B	151	162	Right-handed alpha
Helix 24	AC6	B	179	184	Right-handed 310
Helix 25	AC7	B	211	226	Right-handed alpha
Helix 26	AC8	B	230	242	Right-handed alpha
Helix 27	AC9	B	243	264	Right-handed alpha
Helix 28	AD1	B	281	289	Right-handed alpha
Helix 29	AD2	B	305	311	Right-handed alpha
Helix 30	AD3	B	331	335	Right-handed 310
Helix 31	AD4	B	341	349	Right-handed alpha
Helix 32	AD5	B	363	377	Right-handed alpha
Helix 33	AD6	C	2	10	Right-handed alpha
Helix 34	AD7	C	48	62	Right-handed alpha
Helix 35	AD8	C	72	82	Right-handed alpha
Helix 36	AD9	C	97	107	Right-handed alpha
Helix 37	AE1	C	108	112	Right-handed 310
Helix 38	AE2	C	122	130	Right-handed alpha
Helix 39	AE3	C	151	162	Right-handed alpha
Helix 40	AE4	C	179	184	Right-handed 310
Helix 41	AE5	C	211	226	Right-handed alpha
Helix 42	AE6	C	230	242	Right-handed alpha
Helix 43	AE7	C	243	264	Right-handed alpha
Helix 44	AE8	C	281	289	Right-handed alpha
Helix 45	AE9	C	305	311	Right-handed alpha
Helix 46	AF1	C	331	335	Right-handed 310
Helix 47	AF2	C	341	349	Right-handed alpha
Helix 48	AF3	C	363	377	Right-handed alpha
Helix 49	AF4	D	2	10	Right-handed alpha
Helix 50	AF5	D	48	62	Right-handed alpha
Helix 51	AF6	D	72	82	Right-handed alpha
Helix 52	AF7	D	97	107	Right-handed alpha
Helix 53	AF8	D	108	112	Right-handed 310
Helix 54	AF9	D	122	130	Right-handed alpha
Helix 55	AG1	D	151	162	Right-handed alpha
Helix 56	AG2	D	179	184	Right-handed 310
Helix 57	AG3	D	211	226	Right-handed alpha
Helix 58	AG4	D	230	242	Right-handed alpha
Helix 59	AG5	D	243	264	Right-handed alpha
Helix 60	AG6	D	281	289	Right-handed alpha
Helix 61	AG7	D	305	311	Right-handed alpha
Helix 62	AG8	D	331	335	Right-handed 310
Helix 63	AG9	D	341	349	Right-handed alpha
Helix 64	AH1	D	363	377	Right-handed alpha
Helix 65	AH2	E	2	10	Right-handed alpha
Helix 66	AH3	E	48	62	Right-handed alpha
Helix 67	AH4	E	72	82	Right-handed alpha
Helix 68	AH5	E	97	107	Right-handed alpha
Helix 69	AH6	E	108	112	Right-handed 310
Helix 70	AH7	E	122	130	Right-handed alpha
Helix 71	AH8	E	151	162	Right-handed alpha
Helix 72	AH9	E	179	184	Right-handed 310
Helix 73	AI1	E	211	226	Right-handed alpha
Helix 74	AI2	E	230	242	Right-handed alpha
Helix 75	AI3	E	243	264	Right-handed alpha
Helix 76	AI4	E	281	289	Right-handed alpha
Helix 77	AI5	E	305	311	Right-handed alpha
Helix 78	AI6	E	331	335	Right-handed 310
Helix 79	AI7	E	341	349	Right-handed alpha
Helix 80	AI8	E	363	377	Right-handed alpha
Helix 81	AI9	F	2	10	Right-handed alpha
Helix 82	AJ1	F	48	62	Right-handed alpha
Helix 83	AJ2	F	72	82	Right-handed alpha
Helix 84	AJ3	F	97	107	Right-handed alpha
Helix 85	AJ4	F	108	112	Right-handed 310
Helix 86	AJ5	F	122	130	Right-handed alpha
Helix 87	AJ6	F	151	162	Right-handed alpha
Helix 88	AJ7	F	179	184	Right-handed 310
Helix 89	AJ8	F	211	226	Right-handed alpha
Helix 90	AJ9	F	230	242	Right-handed alpha
Helix 91	AK1	F	243	264	Right-handed alpha
Helix 92	AK2	F	281	289	Right-handed alpha
Helix 93	AK3	F	305	311	Right-handed alpha
Helix 94	AK4	F	331	335	Right-handed 310
Helix 95	AK5	F	341	349	Right-handed alpha
Helix 96	AK6	F	363	377	Right-handed alpha

There are 12 sheets in PDB entry 6LE4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	70	first strand
Strand 2	A	205	209	anti-parallel
Strand 3	A	187	191	anti-parallel
Strand 4	A	165	169	parallel
Strand 5	A	134	140	parallel
Strand 6	A	89	93	parallel
Strand 7	A	114	118	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	268	272	first strand
Strand 2	A	295	300	anti-parallel
Strand 3	A	354	358	anti-parallel
Strand 4	A	328	330	anti-parallel
Strand 5	A	317	318	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	70	first strand
Strand 2	B	205	209	anti-parallel
Strand 3	B	187	191	anti-parallel
Strand 4	B	165	169	parallel
Strand 5	B	134	140	parallel
Strand 6	B	89	93	parallel
Strand 7	B	114	118	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	268	272	first strand
Strand 2	B	295	300	anti-parallel
Strand 3	B	354	358	anti-parallel
Strand 4	B	328	330	anti-parallel
Strand 5	B	317	318	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	70	first strand
Strand 2	C	205	209	anti-parallel
Strand 3	C	187	191	anti-parallel
Strand 4	C	165	169	parallel
Strand 5	C	134	140	parallel
Strand 6	C	89	93	parallel
Strand 7	C	114	118	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	268	272	first strand
Strand 2	C	295	300	anti-parallel
Strand 3	C	354	358	anti-parallel
Strand 4	C	328	330	anti-parallel
Strand 5	C	317	318	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	70	first strand
Strand 2	D	205	209	anti-parallel
Strand 3	D	187	191	anti-parallel
Strand 4	D	165	169	parallel
Strand 5	D	134	140	parallel
Strand 6	D	89	93	parallel
Strand 7	D	114	118	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	268	272	first strand
Strand 2	D	295	300	anti-parallel
Strand 3	D	354	358	anti-parallel
Strand 4	D	328	330	anti-parallel
Strand 5	D	317	318	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	66	70	first strand
Strand 2	E	205	209	anti-parallel
Strand 3	E	187	191	anti-parallel
Strand 4	E	165	169	parallel
Strand 5	E	134	140	parallel
Strand 6	E	89	93	parallel
Strand 7	E	114	118	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	268	272	first strand
Strand 2	E	295	300	anti-parallel
Strand 3	E	354	358	anti-parallel
Strand 4	E	328	330	anti-parallel
Strand 5	E	317	318	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	66	70	first strand
Strand 2	F	205	209	anti-parallel
Strand 3	F	187	191	anti-parallel
Strand 4	F	165	169	parallel
Strand 5	F	134	140	parallel
Strand 6	F	89	93	parallel
Strand 7	F	114	118	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	268	272	first strand
Strand 2	F	295	300	anti-parallel
Strand 3	F	354	358	anti-parallel
Strand 4	F	328	330	anti-parallel
Strand 5	F	317	318	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6LE4

Analysis of interatomic Contacts of Structural Units in PDB entry:
6LE4