Analysis of interatomic Contacts of Structural Units in PDB entry:
6LFL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6LFL entry

There is 1 chain in PDB entry 6LFL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 46SER 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6LFL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 76Right-handed alpha
Helix 2
AA2
A
81 110Right-handed alpha
Helix 3
AA3
A
115 149Right-handed alpha
Helix 4
AA4
A
160 177Right-handed alpha
Helix 5
AA5
A
179 184Right-handed alpha
Helix 6
AA6
A
206 219Right-handed alpha
Helix 7
AA7
A
220 241Right-handed alpha
Helix 8
AA8
A
1015 1027Right-handed alpha
Helix 9
AA9
A
1047 1059Right-handed alpha
Helix 10
AB1
A
1061 1065Right-handed 310
Helix 11
AB2
A
1076 1090Right-handed alpha
Helix 12
AB3
A
1101 1112Right-handed alpha
Helix 13
AB4
A
1125 1134Right-handed alpha
Helix 14
AB5
A
1145 1150Right-handed alpha
Helix 15
AB6
A
1162 1177Right-handed alpha
Helix 16
AB7
A
1181 244Right-handed alpha
Helix 17
AB8
A
246 279Right-handed alpha
Helix 18
AB9
A
290 307Right-handed alpha
Helix 19
AC1
A
308 317Right-handed alpha
Helix 20
AC2
A
318 332Right-handed alpha
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There are 2 sheets in PDB entry 6LFL. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 187first strand
Strand 2
A
195 197anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1093 1096first strand
Strand 2
A
1067 1072parallel
Strand 3
A
1033 1037parallel
Strand 4
A
1114 1117parallel
Strand 5
A
1137 1141parallel
Strand 6
A
1156 1158parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il